Transcript: ENST00000663397.2 LINC02411-207

Description

long intergenic non-protein coding RNA 2411 [Source:HGNC Symbol;Acc:HGNC:53340]

Location

Chromosome 12: 127,631,141-127,632,880 reverse strand.

About this transcript

This transcript has 2 exons and maps to 63 oligo probes.

Gene

This transcript is a product of gene ENSG00000256022.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000747456.1	LINC02411-215	768	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000656677.1	LINC02411-204	2253	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000668337.1	LINC02411-210	1953	No protein	-	lncRNA	-	-
ENST00000670513.1	LINC02411-213	1895	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000670083.1	LINC02411-212	1761	No protein	-	lncRNA	-	-
ENST00000666224.1	LINC02411-208	1728	No protein	-	lncRNA	-	-
ENST00000667656.1	LINC02411-209	1709	No protein	-	lncRNA	-	-
ENST00000662161.1	LINC02411-206	1644	No protein	-	lncRNA	-	-
ENST00000546180.2	LINC02411-203	1423	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000540490.6	LINC02411-201	1360	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000669225.1	LINC02411-211	968	No protein	-	lncRNA	-	-
ENST00000663397.2	LINC02411-207	871	No protein	-	lncRNA	-	-
ENST00000659673.1	LINC02411-205	864	No protein	-	lncRNA	-	-
ENST00000544251.7	LINC02411-202	750	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000747457.1	LINC02411-216	703	No protein	-	lncRNA	-	-
ENST00000670939.1	LINC02411-214	668	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 871 bps,

Version

ENST00000663397.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000663397.2 LINC02411-207

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Transcript: ENST00000663397.2 LINC02411-207

Summary

About Us

Get help

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