Transcript: ENST00000532992.5 LINC02715-202

Description

long intergenic non-protein coding RNA 2715 [Source:HGNC Symbol;Acc:HGNC:54232]

Location

Chromosome 11: 109,355,085-109,583,907 reverse strand.

About this transcript

This transcript has 5 exons and maps to 83 oligo probes.

Gene

This transcript is a product of gene ENSG00000254659.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000818760.1	LINC02715-208	1579	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000819039.1	LINC02715-220	1964	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000819050.1	LINC02715-231	1200	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000819040.1	LINC02715-221	1169	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000667432.1	LINC02715-205	1038	No protein	-	lncRNA	-	-
ENST00000819036.1	LINC02715-217	1006	No protein	-	lncRNA	-	-
ENST00000819041.1	LINC02715-222	995	No protein	-	lncRNA	-	-
ENST00000662064.1	LINC02715-204	928	No protein	-	lncRNA	-	-
ENST00000819045.1	LINC02715-226	924	No protein	-	lncRNA	-	-
ENST00000819044.1	LINC02715-225	828	No protein	-	lncRNA	-	-
ENST00000819046.1	LINC02715-227	811	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000532929.1	LINC02715-201	803	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000819049.1	LINC02715-230	785	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000819047.1	LINC02715-228	778	No protein	-	lncRNA	-	-
ENST00000819468.1	LINC02715-237	777	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000819051.1	LINC02715-232	748	No protein	-	lncRNA	-	-
ENST00000818764.1	LINC02715-212	745	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000819042.1	LINC02715-223	725	No protein	-	lncRNA	-	-
ENST00000819043.1	LINC02715-224	717	No protein	-	lncRNA	-	-
ENST00000819467.1	LINC02715-236	701	No protein	-	lncRNA	-	-
ENST00000818761.1	LINC02715-209	690	No protein	-	lncRNA	-	-
ENST00000818762.1	LINC02715-210	668	No protein	-	lncRNA	-	-
ENST00000534252.2	LINC02715-203	620	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000818763.1	LINC02715-211	620	No protein	-	lncRNA	-	-
ENST00000818768.1	LINC02715-216	607	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000819048.1	LINC02715-229	593	No protein	-	lncRNA	-	-
ENST00000693667.1	LINC02715-207	586	No protein	-	lncRNA	-	-
ENST00000819037.1	LINC02715-218	580	No protein	-	lncRNA	-	-
ENST00000819054.1	LINC02715-235	580	No protein	-	lncRNA	-	-
ENST00000819038.1	LINC02715-219	558	No protein	-	lncRNA	-	-
ENST00000532992.5	LINC02715-202	540	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000819469.1	LINC02715-238	520	No protein	-	lncRNA	-	-
ENST00000818766.1	LINC02715-214	504	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000818765.1	LINC02715-213	503	No protein	-	lncRNA	-	-
ENST00000692099.1	LINC02715-206	490	No protein	-	lncRNA	-	-
ENST00000819053.1	LINC02715-234	463	No protein	-	lncRNA	-	-
ENST00000818767.1	LINC02715-215	431	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000819052.1	LINC02715-233	328	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 540 bps,

Transcript Support Level (TSL)

TSL:4

Version

ENST00000532992.5

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000532992.5 LINC02715-202

Summary

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Transcript: ENST00000532992.5 LINC02715-202

Summary

About Us

Get help

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