Transcript: ENST00000661759.1 LINC02160-202

Description

long intergenic non-protein coding RNA 2160 [Source:HGNC Symbol;Acc:HGNC:53021]

Location

Chromosome 5: 33,229,516-33,284,642 forward strand.

About this transcript

This transcript has 5 exons and maps to 87 oligo probes.

Gene

This transcript is a product of gene ENSG00000251443.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000799291.1	LINC02160-205	367	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000667183.1	LINC02160-203	1580	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000661759.1	LINC02160-202	1351	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000799302.1	LINC02160-216	1249	No protein	-	lncRNA	-	-
ENST00000799303.1	LINC02160-217	1208	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000799317.1	LINC02160-231	1129	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000690843.2	LINC02160-204	1127	No protein	-	lncRNA	-	-
ENST00000799309.1	LINC02160-223	1120	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000799308.1	LINC02160-222	973	No protein	-	lncRNA	-	-
ENST00000799297.1	LINC02160-211	908	No protein	-	lncRNA	-	-
ENST00000799304.1	LINC02160-218	877	No protein	-	lncRNA	-	-
ENST00000799310.1	LINC02160-224	876	No protein	-	lncRNA	-	-
ENST00000799307.1	LINC02160-221	864	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000799306.1	LINC02160-220	857	No protein	-	lncRNA	-	-
ENST00000799293.1	LINC02160-207	797	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000799295.1	LINC02160-209	769	No protein	-	lncRNA	-	-
ENST00000799322.1	LINC02160-236	743	No protein	-	lncRNA	-	-
ENST00000799296.1	LINC02160-210	740	No protein	-	lncRNA	-	-
ENST00000799315.1	LINC02160-229	721	No protein	-	lncRNA	-	-
ENST00000799314.1	LINC02160-228	719	No protein	-	lncRNA	-	-
ENST00000799316.1	LINC02160-230	704	No protein	-	lncRNA	-	-
ENST00000799312.1	LINC02160-226	701	No protein	-	lncRNA	-	-
ENST00000799292.1	LINC02160-206	696	No protein	-	lncRNA	-	-
ENST00000799323.1	LINC02160-237	664	No protein	-	lncRNA	-	-
ENST00000799313.1	LINC02160-227	626	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000799305.1	LINC02160-219	599	No protein	-	lncRNA	-	-
ENST00000799294.1	LINC02160-208	579	No protein	-	lncRNA	-	-
ENST00000799299.1	LINC02160-213	568	No protein	-	lncRNA	-	-
ENST00000503577.1	LINC02160-201	517	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000799301.1	LINC02160-215	510	No protein	-	lncRNA	-	-
ENST00000799324.1	LINC02160-238	489	No protein	-	lncRNA	-	-
ENST00000799298.1	LINC02160-212	486	No protein	-	lncRNA	-	-
ENST00000799300.1	LINC02160-214	436	No protein	-	lncRNA	-	-
ENST00000799311.1	LINC02160-225	426	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000799320.1	LINC02160-234	421	No protein	-	lncRNA	-	-
ENST00000799321.1	LINC02160-235	389	No protein	-	lncRNA	-	-
ENST00000799319.1	LINC02160-233	305	No protein	-	lncRNA	-	-
ENST00000799318.1	LINC02160-232	254	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 1,351 bps,

Version

ENST00000661759.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000661759.1 LINC02160-202

Summary

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Transcript: ENST00000661759.1 LINC02160-202

Summary

About Us

Get help

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