Transcript: ENST00000513617.2 LINC03074-203

Description

long intergenic non-protein coding RNA 3074 [Source:HGNC Symbol;Acc:HGNC:56654]

Location

Chromosome 4: 151,798,824-151,801,586 forward strand.

About this transcript

This transcript has 4 exons and maps to 119 oligo probes.

Gene

This transcript is a product of gene ENSG00000251249.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000504207.2	LINC03074-201	709	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000731483.1	LINC03074-216	1416	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000515329.2	LINC03074-205	2670	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000653501.1	LINC03074-207	1992	No protein	-	lncRNA	-	-
ENST00000731595.1	LINC03074-237	1448	No protein	-	lncRNA	-	-
ENST00000513617.2	LINC03074-203	1272	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000731614.1	LINC03074-256	1134	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000513759.2	LINC03074-204	1113	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000731616.1	LINC03074-258	1105	No protein	-	lncRNA	-	-
ENST00000731615.1	LINC03074-257	1099	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000731597.1	LINC03074-239	1078	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000731484.1	LINC03074-217	1057	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000731486.1	LINC03074-219	1045	No protein	-	lncRNA	-	-
ENST00000732459.1	LINC03074-259	1044	No protein	-	lncRNA	-	-
ENST00000731489.1	LINC03074-222	1016	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000731608.1	LINC03074-250	955	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000731588.1	LINC03074-230	934	No protein	-	lncRNA	-	-
ENST00000731487.1	LINC03074-220	881	No protein	-	lncRNA	-	-
ENST00000731485.1	LINC03074-218	856	No protein	-	lncRNA	-	-
ENST00000670924.2	LINC03074-213	852	No protein	-	lncRNA	-	-
ENST00000731594.1	LINC03074-236	839	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000731490.1	LINC03074-223	834	No protein	-	lncRNA	-	-
ENST00000731606.1	LINC03074-248	828	No protein	-	lncRNA	-	-
ENST00000732460.1	LINC03074-260	807	No protein	-	lncRNA	-	-
ENST00000731607.1	LINC03074-249	806	No protein	-	lncRNA	-	-
ENST00000731488.1	LINC03074-221	802	No protein	-	lncRNA	-	-
ENST00000731611.1	LINC03074-253	780	No protein	-	lncRNA	-	-
ENST00000731590.1	LINC03074-232	778	No protein	-	lncRNA	-	-
ENST00000731491.1	LINC03074-224	775	No protein	-	lncRNA	-	-
ENST00000731601.1	LINC03074-243	758	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000731596.1	LINC03074-238	732	No protein	-	lncRNA	-	-
ENST00000731589.1	LINC03074-231	730	No protein	-	lncRNA	-	-
ENST00000653329.2	LINC03074-206	728	No protein	-	lncRNA	-	-
ENST00000731496.1	LINC03074-229	716	No protein	-	lncRNA	-	-
ENST00000664690.2	LINC03074-211	714	No protein	-	lncRNA	-	-
ENST00000657686.2	LINC03074-208	676	No protein	-	lncRNA	-	-
ENST00000731592.1	LINC03074-234	673	No protein	-	lncRNA	-	-
ENST00000659253.2	LINC03074-209	672	No protein	-	lncRNA	-	-
ENST00000731609.1	LINC03074-251	664	No protein	-	lncRNA	-	-
ENST00000731599.1	LINC03074-241	663	No protein	-	lncRNA	-	-
ENST00000731610.1	LINC03074-252	658	No protein	-	lncRNA	-	-
ENST00000731598.1	LINC03074-240	644	No protein	-	lncRNA	-	-
ENST00000731600.1	LINC03074-242	644	No protein	-	lncRNA	-	-
ENST00000731593.1	LINC03074-235	636	No protein	-	lncRNA	-	-
ENST00000731612.1	LINC03074-254	629	No protein	-	lncRNA	-	-
ENST00000690012.2	LINC03074-215	612	No protein	-	lncRNA	-	-
ENST00000731602.1	LINC03074-244	610	No protein	-	lncRNA	-	-
ENST00000731495.1	LINC03074-228	603	No protein	-	lncRNA	-	-
ENST00000663327.2	LINC03074-210	586	No protein	-	lncRNA	-	-
ENST00000731591.1	LINC03074-233	580	No protein	-	lncRNA	-	-
ENST00000731493.1	LINC03074-226	571	No protein	-	lncRNA	-	-
ENST00000669340.1	LINC03074-212	558	No protein	-	lncRNA	-	-
ENST00000731604.1	LINC03074-246	537	No protein	-	lncRNA	-	-
ENST00000731613.1	LINC03074-255	537	No protein	-	lncRNA	-	-
ENST00000685877.2	LINC03074-214	528	No protein	-	lncRNA	-	-
ENST00000731605.1	LINC03074-247	498	No protein	-	lncRNA	-	-
ENST00000731603.1	LINC03074-245	490	No protein	-	lncRNA	-	-
ENST00000507949.1	LINC03074-202	488	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000731492.1	LINC03074-225	488	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000731494.1	LINC03074-227	449	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,272 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000513617.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000513617.2 LINC03074-203

Summary

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Transcript: ENST00000513617.2 LINC03074-203

Summary

About Us

Get help

Our sister sites

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