Transcript: ENST00000655255.1 LINC01333-206

Description

long intergenic non-protein coding RNA 1333 [Source:HGNC Symbol;Acc:HGNC:50539]

Location

Chromosome 5: 74,321,357-74,340,376 forward strand.

About this transcript

This transcript has 5 exons and maps to 213 oligo probes.

Gene

This transcript is a product of gene ENSG00000249343.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000669685.1	LINC01333-215	1932	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000659118.1	LINC01333-209	1857	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000657940.1	LINC01333-207	1431	No protein	-	lncRNA	-	-
ENST00000655255.1	LINC01333-206	1262	No protein	-	lncRNA	-	-
ENST00000651656.1	LINC01333-203	1251	No protein	-	lncRNA	-	-
ENST00000512458.3	LINC01333-202	1240	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000665644.1	LINC01333-212	1114	No protein	-	lncRNA	-	-
ENST00000654284.1	LINC01333-204	1082	No protein	-	lncRNA	-	-
ENST00000667290.1	LINC01333-213	1048	No protein	-	lncRNA	-	-
ENST00000654749.1	LINC01333-205	1039	No protein	-	lncRNA	-	-
ENST00000657950.1	LINC01333-208	982	No protein	-	lncRNA	-	-
ENST00000662472.2	LINC01333-211	928	No protein	-	lncRNA	-	-
ENST00000830271.1	LINC01333-224	914	No protein	-	lncRNA	-	-
ENST00000659684.2	LINC01333-210	907	No protein	-	lncRNA	-	-
ENST00000830267.1	LINC01333-220	875	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000508083.2	LINC01333-201	864	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000830266.1	LINC01333-219	764	No protein	-	lncRNA	-	-
ENST00000830264.1	LINC01333-217	623	No protein	-	lncRNA	-	-
ENST00000667820.1	LINC01333-214	593	No protein	-	lncRNA	-	-
ENST00000830270.1	LINC01333-223	550	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000830269.1	LINC01333-222	509	No protein	-	lncRNA	-	-
ENST00000671086.1	LINC01333-216	500	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000830265.1	LINC01333-218	387	No protein	-	lncRNA	-	-
ENST00000830268.1	LINC01333-221	307	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 1,262 bps,

Version

ENST00000655255.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000655255.1 LINC01333-206

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Transcript: ENST00000655255.1 LINC01333-206

Summary

About Us

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