Transcript: ENST00000518865.6 HAS2-AS1-203

Description

HAS2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:34340]

Gene Synonyms

HAS2-AS, HAS2AS, HASNT, NCRNA00077

Location

Chromosome 8: 121,639,293-121,644,406 forward strand.

About this transcript

This transcript has 5 exons and maps to 245 oligo probes.

Gene

This transcript is a product of gene ENSG00000248690.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000664717.1	HAS2-AS1-215	1238	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000514180.6	HAS2-AS1-202	2280	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000728136.1	HAS2-AS1-225	2077	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000522197.3	HAS2-AS1-205	1898	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000728130.1	HAS2-AS1-220	1832	No protein	-	lncRNA	-	-
ENST00000728134.1	HAS2-AS1-223	1748	No protein	-	lncRNA	-	-
ENST00000728133.1	HAS2-AS1-222	1716	No protein	-	lncRNA	-	-
ENST00000656304.2	HAS2-AS1-211	1706	No protein	-	lncRNA	-	-
ENST00000728135.1	HAS2-AS1-224	1451	No protein	-	lncRNA	-	-
ENST00000665664.1	HAS2-AS1-216	1394	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000653591.1	HAS2-AS1-209	1351	No protein	-	lncRNA	-	-
ENST00000648171.1	HAS2-AS1-208	1265	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000728137.1	HAS2-AS1-226	1248	No protein	-	lncRNA	-	-
ENST00000671409.1	HAS2-AS1-219	1218	No protein	-	lncRNA	-	-
ENST00000668492.2	HAS2-AS1-217	1136	No protein	-	lncRNA	-	-
ENST00000728138.1	HAS2-AS1-227	1062	No protein	-	lncRNA	-	-
ENST00000656543.1	HAS2-AS1-212	1037	No protein	-	lncRNA	-	-
ENST00000656261.1	HAS2-AS1-210	1032	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000669984.1	HAS2-AS1-218	980	No protein	-	lncRNA	-	-
ENST00000663147.1	HAS2-AS1-214	972	No protein	-	lncRNA	-	-
ENST00000728132.1	HAS2-AS1-221	929	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000518865.6	HAS2-AS1-203	784	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000770507.1	HAS2-AS1-228	729	No protein	-	lncRNA	-	-
ENST00000647560.2	HAS2-AS1-207	726	No protein	-	lncRNA	-	-
ENST00000770510.1	HAS2-AS1-231	704	No protein	-	lncRNA	-	-
ENST00000770508.1	HAS2-AS1-229	664	No protein	-	lncRNA	-	-
ENST00000662694.1	HAS2-AS1-213	635	No protein	-	lncRNA	-	-
ENST00000523550.1	HAS2-AS1-206	611	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000770509.1	HAS2-AS1-230	608	No protein	-	lncRNA	-	-
ENST00000520043.1	HAS2-AS1-204	595	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000770511.1	HAS2-AS1-232	445	No protein	-	lncRNA	-	-
ENST00000458107.3	HAS2-AS1-201	339	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 784 bps,

Transcript Support Level (TSL)

TSL:4

Version

ENST00000518865.6

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000518865.6 HAS2-AS1-203

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Transcript: ENST00000518865.6 HAS2-AS1-203

Summary

About Us

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