Transcript: ENST00000517796.1 CIBAR1-DT-203

Description

CIBAR1 divergent transcript [Source:HGNC Symbol;Acc:HGNC:43644]

Gene Synonyms

LINC00535

Location

Chromosome 8: 93,215,925-93,234,878 reverse strand.

About this transcript

This transcript has 4 exons and maps to 108 oligo probes.

Gene

This transcript is a product of gene ENSG00000246662.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000501400.1	CIBAR1-DT-201	1914	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000770819.1	CIBAR1-DT-223	2375	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000770833.1	CIBAR1-DT-237	1931	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000770834.1	CIBAR1-DT-238	1823	No protein	-	lncRNA	-	-
ENST00000770832.1	CIBAR1-DT-236	1681	No protein	-	lncRNA	-	-
ENST00000770892.1	CIBAR1-DT-295	1607	No protein	-	lncRNA	-	-
ENST00000770835.1	CIBAR1-DT-239	1560	No protein	-	lncRNA	-	-
ENST00000770836.1	CIBAR1-DT-240	1545	No protein	-	lncRNA	-	-
ENST00000770882.1	CIBAR1-DT-286	1536	No protein	-	lncRNA	-	-
ENST00000770850.1	CIBAR1-DT-254	1508	No protein	-	lncRNA	-	-
ENST00000770849.1	CIBAR1-DT-253	1454	No protein	-	lncRNA	-	-
ENST00000741087.1	CIBAR1-DT-206	1378	No protein	-	lncRNA	-	-
ENST00000770838.1	CIBAR1-DT-242	1376	No protein	-	lncRNA	-	-
ENST00000770865.1	CIBAR1-DT-269	1375	No protein	-	lncRNA	-	-
ENST00000770862.1	CIBAR1-DT-266	1364	No protein	-	lncRNA	-	-
ENST00000770885.1	CIBAR1-DT-289	1354	No protein	-	lncRNA	-	-
ENST00000517785.2	CIBAR1-DT-202	1351	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000770851.1	CIBAR1-DT-255	1293	No protein	-	lncRNA	-	-
ENST00000770866.1	CIBAR1-DT-270	1291	No protein	-	lncRNA	-	-
ENST00000770883.1	CIBAR1-DT-287	1285	No protein	-	lncRNA	-	-
ENST00000770810.1	CIBAR1-DT-214	1251	No protein	-	lncRNA	-	-
ENST00000770830.1	CIBAR1-DT-234	1246	No protein	-	lncRNA	-	-
ENST00000770853.1	CIBAR1-DT-257	1243	No protein	-	lncRNA	-	-
ENST00000770863.1	CIBAR1-DT-267	1242	No protein	-	lncRNA	-	-
ENST00000770829.1	CIBAR1-DT-233	1212	No protein	-	lncRNA	-	-
ENST00000770889.1	CIBAR1-DT-292	1210	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000770837.1	CIBAR1-DT-241	1206	No protein	-	lncRNA	-	-
ENST00000770888.1	CIBAR1-DT-291	1190	No protein	-	lncRNA	-	-
ENST00000770861.1	CIBAR1-DT-265	1164	No protein	-	lncRNA	-	-
ENST00000770867.1	CIBAR1-DT-271	1156	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000770808.1	CIBAR1-DT-212	1151	No protein	-	lncRNA	-	-
ENST00000770859.1	CIBAR1-DT-263	1121	No protein	-	lncRNA	-	-
ENST00000770894.1	CIBAR1-DT-297	1119	No protein	-	lncRNA	-	-
ENST00000770864.1	CIBAR1-DT-268	1106	No protein	-	lncRNA	-	-
ENST00000770884.1	CIBAR1-DT-288	1102	No protein	-	lncRNA	-	-
ENST00000770860.1	CIBAR1-DT-264	1091	No protein	-	lncRNA	-	-
ENST00000770811.1	CIBAR1-DT-215	1088	No protein	-	lncRNA	-	-
ENST00000770852.1	CIBAR1-DT-256	1002	No protein	-	lncRNA	-	-
ENST00000770831.1	CIBAR1-DT-235	1001	No protein	-	lncRNA	-	-
ENST00000770839.1	CIBAR1-DT-243	997	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000770828.1	CIBAR1-DT-232	982	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000770812.1	CIBAR1-DT-216	965	No protein	-	lncRNA	-	-
ENST00000770846.1	CIBAR1-DT-250	961	No protein	-	lncRNA	-	-
ENST00000770879.1	CIBAR1-DT-283	951	No protein	-	lncRNA	-	-
ENST00000770868.1	CIBAR1-DT-272	918	No protein	-	lncRNA	-	-
ENST00000770816.1	CIBAR1-DT-220	917	No protein	-	lncRNA	-	-
ENST00000520096.6	CIBAR1-DT-204	895	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000520513.2	CIBAR1-DT-205	878	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000770887.1	CIBAR1-DT-290	857	No protein	-	lncRNA	-	-
ENST00000770842.1	CIBAR1-DT-246	853	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000770814.1	CIBAR1-DT-218	849	No protein	-	lncRNA	-	-
ENST00000770820.1	CIBAR1-DT-224	845	No protein	-	lncRNA	-	-
ENST00000770822.1	CIBAR1-DT-226	841	No protein	-	lncRNA	-	-
ENST00000770881.1	CIBAR1-DT-285	834	No protein	-	lncRNA	-	-
ENST00000770845.1	CIBAR1-DT-249	832	No protein	-	lncRNA	-	-
ENST00000770813.1	CIBAR1-DT-217	827	No protein	-	lncRNA	-	-
ENST00000770848.1	CIBAR1-DT-252	796	No protein	-	lncRNA	-	-
ENST00000770804.1	CIBAR1-DT-208	794	No protein	-	lncRNA	-	-
ENST00000770815.1	CIBAR1-DT-219	787	No protein	-	lncRNA	-	-
ENST00000770827.1	CIBAR1-DT-231	769	No protein	-	lncRNA	-	-
ENST00000770809.1	CIBAR1-DT-213	764	No protein	-	lncRNA	-	-
ENST00000770895.1	CIBAR1-DT-298	753	No protein	-	lncRNA	-	-
ENST00000770821.1	CIBAR1-DT-225	744	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000770840.1	CIBAR1-DT-244	742	No protein	-	lncRNA	-	-
ENST00000770841.1	CIBAR1-DT-245	732	No protein	-	lncRNA	-	-
ENST00000770880.1	CIBAR1-DT-284	730	No protein	-	lncRNA	-	-
ENST00000770876.1	CIBAR1-DT-280	727	No protein	-	lncRNA	-	-
ENST00000770824.1	CIBAR1-DT-228	726	No protein	-	lncRNA	-	-
ENST00000770805.1	CIBAR1-DT-209	717	No protein	-	lncRNA	-	-
ENST00000770875.1	CIBAR1-DT-279	711	No protein	-	lncRNA	-	-
ENST00000770818.1	CIBAR1-DT-222	703	No protein	-	lncRNA	-	-
ENST00000770890.1	CIBAR1-DT-293	703	No protein	-	lncRNA	-	-
ENST00000770807.1	CIBAR1-DT-211	691	No protein	-	lncRNA	-	-
ENST00000770877.1	CIBAR1-DT-281	680	No protein	-	lncRNA	-	-
ENST00000770878.1	CIBAR1-DT-282	676	No protein	-	lncRNA	-	-
ENST00000770843.1	CIBAR1-DT-247	670	No protein	-	lncRNA	-	-
ENST00000803764.1	CIBAR1-DT-304	652	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000770897.1	CIBAR1-DT-300	651	No protein	-	lncRNA	-	-
ENST00000803763.1	CIBAR1-DT-303	649	No protein	-	lncRNA	-	-
ENST00000770873.1	CIBAR1-DT-277	644	No protein	-	lncRNA	-	-
ENST00000770869.1	CIBAR1-DT-273	633	No protein	-	lncRNA	-	-
ENST00000770847.1	CIBAR1-DT-251	629	No protein	-	lncRNA	-	-
ENST00000770823.1	CIBAR1-DT-227	626	No protein	-	lncRNA	-	-
ENST00000770844.1	CIBAR1-DT-248	617	No protein	-	lncRNA	-	-
ENST00000770857.1	CIBAR1-DT-261	614	No protein	-	lncRNA	-	-
ENST00000770858.1	CIBAR1-DT-262	611	No protein	-	lncRNA	-	-
ENST00000770872.1	CIBAR1-DT-276	607	No protein	-	lncRNA	-	-
ENST00000770806.1	CIBAR1-DT-210	603	No protein	-	lncRNA	-	-
ENST00000770825.1	CIBAR1-DT-229	590	No protein	-	lncRNA	-	-
ENST00000770900.1	CIBAR1-DT-301	575	No protein	-	lncRNA	-	-
ENST00000770896.1	CIBAR1-DT-299	564	No protein	-	lncRNA	-	-
ENST00000770855.1	CIBAR1-DT-259	558	No protein	-	lncRNA	-	-
ENST00000770871.1	CIBAR1-DT-275	557	No protein	-	lncRNA	-	-
ENST00000517796.1	CIBAR1-DT-203	532	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000770870.1	CIBAR1-DT-274	514	No protein	-	lncRNA	-	-
ENST00000770854.1	CIBAR1-DT-258	513	No protein	-	lncRNA	-	-
ENST00000770803.1	CIBAR1-DT-207	510	No protein	-	lncRNA	-	-
ENST00000770826.1	CIBAR1-DT-230	499	No protein	-	lncRNA	-	-
ENST00000770901.1	CIBAR1-DT-302	483	No protein	-	lncRNA	-	-
ENST00000770856.1	CIBAR1-DT-260	480	No protein	-	lncRNA	-	-
ENST00000770817.1	CIBAR1-DT-221	450	No protein	-	lncRNA	-	-
ENST00000770891.1	CIBAR1-DT-294	447	No protein	-	lncRNA	-	-
ENST00000770893.1	CIBAR1-DT-296	392	No protein	-	lncRNA	-	-
ENST00000770874.1	CIBAR1-DT-278	352	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 532 bps,

Transcript Support Level (TSL)

TSL:4

Version

ENST00000517796.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000517796.1 CIBAR1-DT-203

Summary

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Transcript: ENST00000517796.1 CIBAR1-DT-203

Summary

About Us

Get help

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