Transcript: ENST00000523786.6 LINC00968-208

Description

long intergenic non-protein coding RNA 968 [Source:HGNC Symbol;Acc:HGNC:48727]

Location

Chromosome 8: 56,518,376-56,559,497 reverse strand.

About this transcript

This transcript has 3 exons and maps to 378 oligo probes.

Gene

This transcript is a product of gene ENSG00000246430.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000524338.3	LINC00968-209	2843	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000523664.3	LINC00968-206	2770	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000692050.2	LINC00968-212	2655	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000665904.3	LINC00968-211	2595	No protein	-	lncRNA	-	-
ENST00000756219.1	LINC00968-234	2501	No protein	-	lncRNA	-	-
ENST00000756218.1	LINC00968-233	2420	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000756220.1	LINC00968-235	2387	No protein	-	lncRNA	-	-
ENST00000499425.2	LINC00968-201	2369	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000756199.1	LINC00968-214	2339	No protein	-	lncRNA	-	-
ENST00000756224.1	LINC00968-239	2317	No protein	-	lncRNA	-	-
ENST00000756204.1	LINC00968-219	2305	No protein	-	lncRNA	-	-
ENST00000523786.6	LINC00968-208	2301	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000756221.1	LINC00968-236	2211	No protein	-	lncRNA	-	-
ENST00000756198.1	LINC00968-213	2206	No protein	-	lncRNA	-	-
ENST00000756222.1	LINC00968-237	2186	No protein	-	lncRNA	-	-
ENST00000756206.1	LINC00968-221	2154	No protein	-	lncRNA	-	-
ENST00000756203.1	LINC00968-218	1956	No protein	-	lncRNA	-	-
ENST00000756200.1	LINC00968-215	1836	No protein	-	lncRNA	-	-
ENST00000756223.1	LINC00968-238	1782	No protein	-	lncRNA	-	-
ENST00000756202.1	LINC00968-217	1657	No protein	-	lncRNA	-	-
ENST00000756201.1	LINC00968-216	1637	No protein	-	lncRNA	-	-
ENST00000523166.2	LINC00968-205	949	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000756215.1	LINC00968-230	828	No protein	-	lncRNA	-	-
ENST00000756211.1	LINC00968-226	810	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000756207.1	LINC00968-222	745	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000756212.1	LINC00968-227	719	No protein	-	lncRNA	-	-
ENST00000756217.1	LINC00968-232	681	No protein	-	lncRNA	-	-
ENST00000756226.1	LINC00968-241	667	No protein	-	lncRNA	-	-
ENST00000756214.1	LINC00968-229	625	No protein	-	lncRNA	-	-
ENST00000756792.1	LINC00968-244	607	No protein	-	lncRNA	-	-
ENST00000518943.1	LINC00968-202	569	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000519144.5	LINC00968-203	564	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000756213.1	LINC00968-228	561	No protein	-	lncRNA	-	-
ENST00000523724.2	LINC00968-207	560	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000521483.1	LINC00968-204	554	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000756791.1	LINC00968-243	551	No protein	-	lncRNA	-	-
ENST00000756209.1	LINC00968-224	537	No protein	-	lncRNA	-	-
ENST00000653444.1	LINC00968-210	519	No protein	-	lncRNA	-	-
ENST00000756225.1	LINC00968-240	485	No protein	-	lncRNA	-	-
ENST00000756205.1	LINC00968-220	444	No protein	-	lncRNA	-	-
ENST00000756210.1	LINC00968-225	424	No protein	-	lncRNA	-	-
ENST00000756208.1	LINC00968-223	408	No protein	-	lncRNA	-	-
ENST00000756227.1	LINC00968-242	373	No protein	-	lncRNA	-	-
ENST00000756216.1	LINC00968-231	298	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 2,301 bps,

Transcript Support Level (TSL)

TSL:4

Version

ENST00000523786.6

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000523786.6 LINC00968-208

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Transcript: ENST00000523786.6 LINC00968-208

Summary

About Us

Get help

Our sister sites

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