Transcript: ENST00000487624.2 CFAP20DC-DT-201

Description

CFAP20DC divergent transcript [Source:HGNC Symbol;Acc:HGNC:55618]

Location

Chromosome 3: 59,064,975-59,119,525 forward strand.

About this transcript

This transcript has 2 exons and maps to 102 oligo probes.

Gene

This transcript is a product of gene ENSG00000243295.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000668131.1	CFAP20DC-DT-209	1093	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000655190.1	CFAP20DC-DT-202	1642	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000661035.1	CFAP20DC-DT-205	1592	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000663318.1	CFAP20DC-DT-206	1427	No protein	-	lncRNA	-	-
ENST00000665883.1	CFAP20DC-DT-208	1251	No protein	-	lncRNA	-	-
ENST00000668989.1	CFAP20DC-DT-210	1199	No protein	-	lncRNA	-	-
ENST00000664511.1	CFAP20DC-DT-207	1183	No protein	-	lncRNA	-	-
ENST00000726403.1	CFAP20DC-DT-213	908	No protein	-	lncRNA	-	-
ENST00000487624.2	CFAP20DC-DT-201	872	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000726407.1	CFAP20DC-DT-217	788	No protein	-	lncRNA	-	-
ENST00000659086.1	CFAP20DC-DT-203	769	No protein	-	lncRNA	-	-
ENST00000670321.1	CFAP20DC-DT-211	749	No protein	-	lncRNA	-	-
ENST00000726405.1	CFAP20DC-DT-215	689	No protein	-	lncRNA	-	-
ENST00000660278.1	CFAP20DC-DT-204	688	No protein	-	lncRNA	-	-
ENST00000726406.1	CFAP20DC-DT-216	563	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000726402.1	CFAP20DC-DT-212	547	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000765325.1	CFAP20DC-DT-219	464	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000765328.1	CFAP20DC-DT-222	446	No protein	-	lncRNA	-	-
ENST00000765324.1	CFAP20DC-DT-218	405	No protein	-	lncRNA	-	-
ENST00000765329.1	CFAP20DC-DT-223	405	No protein	-	lncRNA	-	-
ENST00000765327.1	CFAP20DC-DT-221	380	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000726404.1	CFAP20DC-DT-214	340	No protein	-	lncRNA	-	-
ENST00000765326.1	CFAP20DC-DT-220	312	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 872 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000487624.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000487624.2 CFAP20DC-DT-201

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Transcript: ENST00000487624.2 CFAP20DC-DT-201

Summary

About Us

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