Transcript: ENST00000473756.2 LINC00973-201

Description

long intergenic non-protein coding RNA 973 [Source:HGNC Symbol;Acc:HGNC:48868]

Gene Synonyms

CTD-2021J15.2

Location

Chromosome 3: 98,981,012-98,984,483 forward strand.

About this transcript

This transcript has 2 exons and maps to 200 oligo probes.

Gene

This transcript is a product of gene ENSG00000240476.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000474798.2	LINC00973-202	1392	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000473756.2	LINC00973-201	2395	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000755862.1	LINC00973-233	1894	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000755863.1	LINC00973-234	1561	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000755847.1	LINC00973-218	1535	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000755867.1	LINC00973-238	1507	No protein	-	lncRNA	-	-
ENST00000755856.1	LINC00973-227	1490	No protein	-	lncRNA	-	-
ENST00000715232.1	LINC00973-205	1356	No protein	-	lncRNA	-	-
ENST00000755838.1	LINC00973-209	1349	No protein	-	lncRNA	-	-
ENST00000755840.1	LINC00973-211	1254	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000755839.1	LINC00973-210	1175	No protein	-	lncRNA	-	-
ENST00000755865.1	LINC00973-236	1172	No protein	-	lncRNA	-	-
ENST00000755864.1	LINC00973-235	1129	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000755875.1	LINC00973-246	1104	No protein	-	lncRNA	-	-
ENST00000715233.1	LINC00973-206	1001	No protein	-	lncRNA	-	-
ENST00000755868.1	LINC00973-239	963	No protein	-	lncRNA	-	-
ENST00000755869.1	LINC00973-240	955	No protein	-	lncRNA	-	-
ENST00000755872.1	LINC00973-243	937	No protein	-	lncRNA	-	-
ENST00000715234.1	LINC00973-207	919	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000755858.1	LINC00973-229	851	No protein	-	lncRNA	-	-
ENST00000755870.1	LINC00973-241	825	No protein	-	lncRNA	-	-
ENST00000755855.1	LINC00973-226	823	No protein	-	lncRNA	-	-
ENST00000715231.1	LINC00973-204	814	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000755852.1	LINC00973-223	782	No protein	-	lncRNA	-	-
ENST00000755854.1	LINC00973-225	777	No protein	-	lncRNA	-	-
ENST00000755848.1	LINC00973-219	695	No protein	-	lncRNA	-	-
ENST00000755851.1	LINC00973-222	677	No protein	-	lncRNA	-	-
ENST00000755866.1	LINC00973-237	677	No protein	-	lncRNA	-	-
ENST00000749131.1	LINC00973-208	673	No protein	-	lncRNA	-	-
ENST00000755846.1	LINC00973-217	640	No protein	-	lncRNA	-	-
ENST00000755842.1	LINC00973-213	628	No protein	-	lncRNA	-	-
ENST00000701980.2	LINC00973-203	617	No protein	-	lncRNA	-	-
ENST00000755843.1	LINC00973-214	600	No protein	-	lncRNA	-	-
ENST00000755841.1	LINC00973-212	577	No protein	-	lncRNA	-	-
ENST00000755871.1	LINC00973-242	564	No protein	-	lncRNA	-	-
ENST00000755844.1	LINC00973-215	562	No protein	-	lncRNA	-	-
ENST00000755873.1	LINC00973-244	546	No protein	-	lncRNA	-	-
ENST00000755861.1	LINC00973-232	532	No protein	-	lncRNA	-	-
ENST00000755849.1	LINC00973-220	517	No protein	-	lncRNA	-	-
ENST00000755845.1	LINC00973-216	509	No protein	-	lncRNA	-	-
ENST00000755859.1	LINC00973-230	501	No protein	-	lncRNA	-	-
ENST00000755874.1	LINC00973-245	489	No protein	-	lncRNA	-	-
ENST00000755860.1	LINC00973-231	474	No protein	-	lncRNA	-	-
ENST00000755853.1	LINC00973-224	470	No protein	-	lncRNA	-	-
ENST00000755857.1	LINC00973-228	396	No protein	-	lncRNA	-	-
ENST00000755876.1	LINC00973-247	387	No protein	-	lncRNA	-	-
ENST00000755850.1	LINC00973-221	300	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 2,395 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000473756.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000473756.2 LINC00973-201

Summary

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Transcript: ENST00000473756.2 LINC00973-201

Summary

About Us

Get help

Our sister sites

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