Transcript: ENST00000451392.6 LINC00607-206

Description

long intergenic non-protein coding RNA 607 [Source:HGNC Symbol;Acc:HGNC:43944]

Location

Chromosome 2: 215,623,607-215,831,590 reverse strand.

About this transcript

This transcript has 6 exons and maps to 332 oligo probes.

Gene

This transcript is a product of gene ENSG00000235770.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000767126.1	LINC00607-214	2501	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000445174.5	LINC00607-205	3690	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000662624.1	LINC00607-212	3218	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000767135.1	LINC00607-223	2357	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000423530.5	LINC00607-204	2104	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000767133.1	LINC00607-221	2088	No protein	-	lncRNA	-	-
ENST00000767137.1	LINC00607-225	1984	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000767131.1	LINC00607-219	1945	No protein	-	lncRNA	-	-
ENST00000659768.1	LINC00607-210	1940	No protein	-	lncRNA	-	-
ENST00000655131.1	LINC00607-209	1752	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000451392.6	LINC00607-206	1747	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000767136.1	LINC00607-224	1733	No protein	-	lncRNA	-	-
ENST00000655043.1	LINC00607-208	1697	No protein	-	lncRNA	-	-
ENST00000767127.1	LINC00607-215	1695	No protein	-	lncRNA	-	-
ENST00000767156.1	LINC00607-244	1549	No protein	-	lncRNA	-	-
ENST00000767139.1	LINC00607-227	1528	No protein	-	lncRNA	-	-
ENST00000767134.1	LINC00607-222	1520	No protein	-	lncRNA	-	-
ENST00000654368.1	LINC00607-207	1404	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000767132.1	LINC00607-220	1349	No protein	-	lncRNA	-	-
ENST00000767143.1	LINC00607-231	1174	No protein	-	lncRNA	-	-
ENST00000767130.1	LINC00607-218	1141	No protein	-	lncRNA	-	-
ENST00000664275.1	LINC00607-213	1123	No protein	-	lncRNA	-	-
ENST00000767128.1	LINC00607-216	1075	No protein	-	lncRNA	-	-
ENST00000767145.1	LINC00607-233	1034	No protein	-	lncRNA	-	-
ENST00000767160.1	LINC00607-248	1027	No protein	-	lncRNA	-	-
ENST00000661231.1	LINC00607-211	1024	No protein	-	lncRNA	-	-
ENST00000767159.1	LINC00607-247	1012	No protein	-	lncRNA	-	-
ENST00000767144.1	LINC00607-232	973	No protein	-	lncRNA	-	-
ENST00000767148.1	LINC00607-236	946	No protein	-	lncRNA	-	-
ENST00000767129.1	LINC00607-217	945	No protein	-	lncRNA	-	-
ENST00000767138.1	LINC00607-226	942	No protein	-	lncRNA	-	-
ENST00000767158.1	LINC00607-246	932	No protein	-	lncRNA	-	-
ENST00000767153.1	LINC00607-241	912	No protein	-	lncRNA	-	-
ENST00000767147.1	LINC00607-235	899	No protein	-	lncRNA	-	-
ENST00000767146.1	LINC00607-234	874	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000417922.2	LINC00607-202	792	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000767154.1	LINC00607-242	761	No protein	-	lncRNA	-	-
ENST00000767155.1	LINC00607-243	759	No protein	-	lncRNA	-	-
ENST00000767149.1	LINC00607-237	752	No protein	-	lncRNA	-	-
ENST00000419922.2	LINC00607-203	723	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000767142.1	LINC00607-230	722	No protein	-	lncRNA	-	-
ENST00000767157.1	LINC00607-245	691	No protein	-	lncRNA	-	-
ENST00000767151.1	LINC00607-239	634	No protein	-	lncRNA	-	-
ENST00000767140.1	LINC00607-228	589	No protein	-	lncRNA	-	-
ENST00000767150.1	LINC00607-238	575	No protein	-	lncRNA	-	-
ENST00000767141.1	LINC00607-229	570	No protein	-	lncRNA	-	-
ENST00000413563.6	LINC00607-201	453	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000767161.1	LINC00607-249	338	No protein	-	lncRNA	-	-
ENST00000767152.1	LINC00607-240	280	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 1,747 bps,

Transcript Support Level (TSL)

TSL:4

Version

ENST00000451392.6

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000451392.6 LINC00607-206

Summary

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Transcript: ENST00000451392.6 LINC00607-206

Summary

About Us

Get help

Our sister sites

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