Transcript: ENST00000662421.2 LINC02248-204

Description

long intergenic non-protein coding RNA 2248 [Source:HGNC Symbol;Acc:HGNC:53147]

Location

Chromosome 15: 26,395,072-26,449,299 forward strand.

About this transcript

This transcript has 3 exons and maps to 126 oligo probes.

Gene

This transcript is a product of gene ENSG00000235160.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000826806.1	LINC02248-207	2254	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000658140.1	LINC02248-203	1893	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000701365.1	LINC02248-206	1872	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000826816.1	LINC02248-217	1815	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000826823.1	LINC02248-224	1688	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000670116.1	LINC02248-205	1569	No protein	-	lncRNA	-	-
ENST00000451579.3	LINC02248-202	1540	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000662421.2	LINC02248-204	1459	No protein	-	lncRNA	-	-
ENST00000826810.1	LINC02248-211	1201	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000826809.1	LINC02248-210	1195	No protein	-	lncRNA	-	-
ENST00000826812.1	LINC02248-213	952	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000826820.1	LINC02248-221	861	No protein	-	lncRNA	-	-
ENST00000826815.1	LINC02248-216	766	No protein	-	lncRNA	-	-
ENST00000826814.1	LINC02248-215	728	No protein	-	lncRNA	-	-
ENST00000826813.1	LINC02248-214	723	No protein	-	lncRNA	-	-
ENST00000826808.1	LINC02248-209	650	No protein	-	lncRNA	-	-
ENST00000826817.1	LINC02248-218	567	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000826807.1	LINC02248-208	542	No protein	-	lncRNA	-	-
ENST00000826821.1	LINC02248-222	537	No protein	-	lncRNA	-	-
ENST00000450324.1	LINC02248-201	516	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000826819.1	LINC02248-220	503	No protein	-	lncRNA	-	-
ENST00000826822.1	LINC02248-223	436	No protein	-	lncRNA	-	-
ENST00000826818.1	LINC02248-219	399	No protein	-	lncRNA	-	-
ENST00000826811.1	LINC02248-212	346	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,459 bps,

Version

ENST00000662421.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000662421.2 LINC02248-204

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Transcript: ENST00000662421.2 LINC02248-204

Summary

About Us

Get help

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