Transcript: ENST00000438158.2 LINC01705-204

Description

long intergenic non-protein coding RNA 1705 [Source:HGNC Symbol;Acc:HGNC:52493]

Gene Synonyms

ERLR, RP11-400N13.3

Location

Chromosome 1: 222,041,703-222,064,817 reverse strand.

About this transcript

This transcript has 3 exons and maps to 135 oligo probes.

Gene

This transcript is a product of gene ENSG00000232679.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000715677.1	LINC01705-208	1305	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000826168.1	LINC01705-212	1907	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000826165.1	LINC01705-209	1145	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000826180.1	LINC01705-224	1142	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000826167.1	LINC01705-211	1136	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000658927.1	LINC01705-205	1070	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000826174.1	LINC01705-218	968	No protein	-	lncRNA	-	-
ENST00000826176.1	LINC01705-220	898	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000826184.1	LINC01705-228	893	No protein	-	lncRNA	-	-
ENST00000433576.6	LINC01705-203	886	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000668844.1	LINC01705-207	873	No protein	-	lncRNA	-	-
ENST00000826170.1	LINC01705-214	838	No protein	-	lncRNA	-	-
ENST00000826169.1	LINC01705-213	780	No protein	-	lncRNA	-	-
ENST00000826175.1	LINC01705-219	762	No protein	-	lncRNA	-	-
ENST00000826183.1	LINC01705-227	746	No protein	-	lncRNA	-	-
ENST00000665303.2	LINC01705-206	726	No protein	-	lncRNA	-	-
ENST00000826173.1	LINC01705-217	715	No protein	-	lncRNA	-	-
ENST00000826166.1	LINC01705-210	701	No protein	-	lncRNA	-	-
ENST00000826177.1	LINC01705-221	646	No protein	-	lncRNA	-	-
ENST00000438158.2	LINC01705-204	618	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000412445.1	LINC01705-201	605	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000826171.1	LINC01705-215	574	No protein	-	lncRNA	-	-
ENST00000826178.1	LINC01705-222	545	No protein	-	lncRNA	-	-
ENST00000826181.1	LINC01705-225	540	No protein	-	lncRNA	-	-
ENST00000826172.1	LINC01705-216	535	No protein	-	lncRNA	-	-
ENST00000826179.1	LINC01705-223	528	No protein	-	lncRNA	-	-
ENST00000431729.3	LINC01705-202	477	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000826182.1	LINC01705-226	432	No protein	-	lncRNA	-	-
ENST00000826185.1	LINC01705-229	252	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 618 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000438158.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000438158.2 LINC01705-204

Summary

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Transcript: ENST00000438158.2 LINC01705-204

Summary

About Us

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