Transcript: ENST00000422909.1

Description

novel transcript

Location

Chromosome 9: 73,573,615-73,579,498 forward strand.

About this transcript

This transcript has 3 exons and maps to 132 oligo probes.

Gene

This transcript is a product of gene ENSG00000232590.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000715873.1	-	383	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000763827.1	-	2180	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000763829.1	-	2094	No protein	-	lncRNA	-	-
ENST00000763806.1	-	1676	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000763807.1	-	1513	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000763808.1	-	1507	No protein	-	lncRNA	-	-
ENST00000763809.1	-	1163	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000715872.1	-	1111	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000763812.1	-	980	No protein	-	lncRNA	-	-
ENST00000763826.1	-	933	No protein	-	lncRNA	-	-
ENST00000763811.1	-	914	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000763810.1	-	896	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000763821.1	-	888	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000763822.1	-	845	No protein	-	lncRNA	-	-
ENST00000763819.1	-	807	No protein	-	lncRNA	-	-
ENST00000763830.1	-	774	No protein	-	lncRNA	-	-
ENST00000763820.1	-	736	No protein	-	lncRNA	-	-
ENST00000763813.1	-	728	No protein	-	lncRNA	-	-
ENST00000763815.1	-	726	No protein	-	lncRNA	-	-
ENST00000763818.1	-	686	No protein	-	lncRNA	-	-
ENST00000763816.1	-	654	No protein	-	lncRNA	-	-
ENST00000422909.1	-	624	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000715871.1	-	616	No protein	-	lncRNA	-	-
ENST00000763835.1	-	598	No protein	-	lncRNA	-	-
ENST00000763817.1	-	581	No protein	-	lncRNA	-	-
ENST00000763839.1	-	576	No protein	-	lncRNA	-	-
ENST00000763814.1	-	575	No protein	-	lncRNA	-	-
ENST00000763834.1	-	562	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000763824.1	-	551	No protein	-	lncRNA	-	-
ENST00000763828.1	-	519	No protein	-	lncRNA	-	-
ENST00000763831.1	-	498	No protein	-	lncRNA	-	-
ENST00000763825.1	-	461	No protein	-	lncRNA	-	-
ENST00000763823.1	-	450	No protein	-	lncRNA	-	-
ENST00000763832.1	-	415	No protein	-	lncRNA	-	-
ENST00000763833.1	-	373	No protein	-	lncRNA	-	-
ENST00000763836.1	-	361	No protein	-	lncRNA	-	-
ENST00000763838.1	-	298	No protein	-	lncRNA	-	-
ENST00000763837.1	-	290	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 624 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000422909.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000422909.1

Summary

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Transcript: ENST00000422909.1

Summary

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