Transcript: ENST00000448490.1 LINC00865-201

Description

long intergenic non-protein coding RNA 865 [Source:HGNC Symbol;Acc:HGNC:45170]

Location

Chromosome 10: 89,829,556-89,840,861 forward strand.

About this transcript

This transcript has 3 exons and maps to 254 oligo probes.

Gene

This transcript is a product of gene ENSG00000232229.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000664430.1	LINC00865-204	1100	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000448963.5	LINC00865-202	4272	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000448490.1	LINC00865-201	3891	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000686130.2	LINC00865-207	3816	No protein	-	lncRNA	-	-
ENST00000749375.1	LINC00865-214	1289	No protein	-	lncRNA	-	-
ENST00000670043.1	LINC00865-206	1241	No protein	-	lncRNA	-	-
ENST00000667153.1	LINC00865-205	1213	No protein	-	lncRNA	-	-
ENST00000749376.1	LINC00865-215	999	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000749380.1	LINC00865-219	953	No protein	-	lncRNA	-	-
ENST00000629067.2	LINC00865-203	947	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000715760.1	LINC00865-209	891	No protein	-	lncRNA	-	-
ENST00000749372.1	LINC00865-211	861	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000749373.1	LINC00865-212	815	No protein	-	lncRNA	-	-
ENST00000749374.1	LINC00865-213	773	No protein	-	lncRNA	-	-
ENST00000749378.1	LINC00865-217	738	No protein	-	lncRNA	-	-
ENST00000749377.1	LINC00865-216	673	No protein	-	lncRNA	-	-
ENST00000749371.1	LINC00865-210	653	No protein	-	lncRNA	-	-
ENST00000749379.1	LINC00865-218	568	No protein	-	lncRNA	-	-
ENST00000692187.1	LINC00865-208	555	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 3,891 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENST00000448490.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000448490.1 LINC00865-201

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Transcript: ENST00000448490.1 LINC00865-201

Summary

About Us

Get help

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