Transcript: ENST00000644648.1 LINC01036-209

Description

long intergenic non-protein coding RNA 1036 [Source:HGNC Symbol;Acc:HGNC:49024]

Location

Chromosome 1: 187,261,509-187,487,191 forward strand.

About this transcript

This transcript has 4 exons and maps to 37 oligo probes.

Gene

This transcript is a product of gene ENSG00000230426.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000643891.1	LINC01036-207	1753	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000644419.2	LINC01036-208	3246	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000667298.1	LINC01036-216	3178	No protein	-	lncRNA	-	-
ENST00000644648.1	LINC01036-209	3083	No protein	-	lncRNA	-	-
ENST00000429725.1	LINC01036-201	2393	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000614505.1	LINC01036-204	2234	No protein	-	lncRNA	-	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENST00000692148.1	LINC01036-218	2203	No protein	-	lncRNA	-	-
ENST00000744930.1	LINC01036-219	1582	No protein	-	lncRNA	-	-
ENST00000664099.1	LINC01036-214	1555	No protein	-	lncRNA	-	-
ENST00000772250.1	LINC01036-241	1549	No protein	-	lncRNA	-	-
ENST00000772253.1	LINC01036-244	1396	No protein	-	lncRNA	-	-
ENST00000657376.1	LINC01036-211	1359	No protein	-	lncRNA	-	-
ENST00000772264.1	LINC01036-255	1349	No protein	-	lncRNA	-	-
ENST00000643044.1	LINC01036-206	1313	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000670356.1	LINC01036-217	1275	No protein	-	lncRNA	-	-
ENST00000744934.1	LINC01036-223	1222	No protein	-	lncRNA	-	-
ENST00000772252.1	LINC01036-243	1169	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000772234.1	LINC01036-225	1159	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000662036.1	LINC01036-213	1157	No protein	-	lncRNA	-	-
ENST00000659970.1	LINC01036-212	1142	No protein	-	lncRNA	-	-
ENST00000609113.3	LINC01036-203	1137	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENST00000744933.1	LINC01036-222	1117	No protein	-	lncRNA	-	-
ENST00000645691.1	LINC01036-210	1110	No protein	-	lncRNA	-	-
ENST00000744931.1	LINC01036-220	1101	No protein	-	lncRNA	-	-
ENST00000772236.1	LINC01036-227	1088	No protein	-	lncRNA	-	-
ENST00000744932.1	LINC01036-221	1052	No protein	-	lncRNA	-	-
ENST00000772235.1	LINC01036-226	946	No protein	-	lncRNA	-	-
ENST00000667049.1	LINC01036-215	944	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000642737.1	LINC01036-205	877	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000772237.1	LINC01036-228	873	No protein	-	lncRNA	-	-
ENST00000772241.1	LINC01036-232	868	No protein	-	lncRNA	-	-
ENST00000458683.1	LINC01036-202	858	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000772238.1	LINC01036-229	848	No protein	-	lncRNA	-	-
ENST00000772240.1	LINC01036-231	818	No protein	-	lncRNA	-	-
ENST00000772259.1	LINC01036-250	810	No protein	-	lncRNA	-	-
ENST00000772247.1	LINC01036-238	737	No protein	-	lncRNA	-	-
ENST00000772249.1	LINC01036-240	690	No protein	-	lncRNA	-	-
ENST00000772245.1	LINC01036-236	681	No protein	-	lncRNA	-	-
ENST00000772255.1	LINC01036-246	659	No protein	-	lncRNA	-	-
ENST00000772246.1	LINC01036-237	647	No protein	-	lncRNA	-	-
ENST00000772239.1	LINC01036-230	638	No protein	-	lncRNA	-	-
ENST00000772233.1	LINC01036-224	605	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000772251.1	LINC01036-242	605	No protein	-	lncRNA	-	-
ENST00000772242.1	LINC01036-233	585	No protein	-	lncRNA	-	-
ENST00000772248.1	LINC01036-239	581	No protein	-	lncRNA	-	-
ENST00000772262.1	LINC01036-253	580	No protein	-	lncRNA	-	-
ENST00000772243.1	LINC01036-234	579	No protein	-	lncRNA	-	-
ENST00000772260.1	LINC01036-251	530	No protein	-	lncRNA	-	-
ENST00000772265.1	LINC01036-256	498	No protein	-	lncRNA	-	-
ENST00000772254.1	LINC01036-245	490	No protein	-	lncRNA	-	-
ENST00000772256.1	LINC01036-247	488	No protein	-	lncRNA	-	-
ENST00000772244.1	LINC01036-235	471	No protein	-	lncRNA	-	-
ENST00000847679.1	LINC01036-257	470	No protein	-	lncRNA	-	-
ENST00000772261.1	LINC01036-252	454	No protein	-	lncRNA	-	-
ENST00000772257.1	LINC01036-248	445	No protein	-	lncRNA	-	-
ENST00000772258.1	LINC01036-249	445	No protein	-	lncRNA	-	-
ENST00000772263.1	LINC01036-254	412	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 3,083 bps,

Version

ENST00000644648.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

Transcript: ENST00000644648.1 LINC01036-209

Summary

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Transcript: ENST00000644648.1 LINC01036-209

Summary

About Us

Get help

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