Transcript: ENST00000416473.3 FRMD3-AS1-201

Description

FRMD3 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:55790]

Location

Chromosome 9: 83,219,281-83,235,049 forward strand.

About this transcript

This transcript has 3 exons and maps to 110 oligo probes.

Gene

This transcript is a product of gene ENSG00000229109.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000798817.1	FRMD3-AS1-205	933	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000662757.2	FRMD3-AS1-202	4617	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000416473.3	FRMD3-AS1-201	1301	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000798818.1	FRMD3-AS1-206	1130	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000668931.1	FRMD3-AS1-204	1088	No protein	-	lncRNA	-	-
ENST00000798820.1	FRMD3-AS1-208	1007	No protein	-	lncRNA	-	-
ENST00000798819.1	FRMD3-AS1-207	658	No protein	-	lncRNA	-	-
ENST00000665291.1	FRMD3-AS1-203	532	No protein	-	lncRNA	-	-
ENST00000798823.1	FRMD3-AS1-211	415	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000798822.1	FRMD3-AS1-210	316	No protein	-	lncRNA	-	-
ENST00000798821.1	FRMD3-AS1-209	225	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,301 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000416473.3

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000416473.3 FRMD3-AS1-201

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Transcript: ENST00000416473.3 FRMD3-AS1-201

Summary

About Us

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