Transcript: ENST00000668463.1 LINC01277-210

Description

long intergenic non-protein coding RNA 1277 [Source:HGNC Symbol;Acc:HGNC:50334]

Location

Chromosome 6: 143,021,620-143,037,589 reverse strand.

About this transcript

This transcript has 2 exons and maps to 167 oligo probes.

Gene

This transcript is a product of gene ENSG00000229017.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000446115.2	LINC01277-202	1640	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000419957.6	LINC01277-201	2398	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000657620.1	LINC01277-206	1702	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000666199.1	LINC01277-209	1659	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000662381.1	LINC01277-208	1531	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000823548.1	LINC01277-214	1395	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000823549.1	LINC01277-215	1309	No protein	-	lncRNA	-	-
ENST00000670340.1	LINC01277-211	1093	No protein	-	lncRNA	-	-
ENST00000657496.1	LINC01277-205	1028	No protein	-	lncRNA	-	-
ENST00000823554.1	LINC01277-220	962	No protein	-	lncRNA	-	-
ENST00000668463.1	LINC01277-210	935	No protein	-	lncRNA	-	-
ENST00000653679.2	LINC01277-204	933	No protein	-	lncRNA	-	-
ENST00000823550.1	LINC01277-216	843	No protein	-	lncRNA	-	-
ENST00000823551.1	LINC01277-217	814	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000823552.1	LINC01277-218	778	No protein	-	lncRNA	-	-
ENST00000823553.1	LINC01277-219	710	No protein	-	lncRNA	-	-
ENST00000661404.1	LINC01277-207	698	No protein	-	lncRNA	-	-
ENST00000823546.1	LINC01277-212	571	No protein	-	lncRNA	-	-
ENST00000454588.1	LINC01277-203	552	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000823556.1	LINC01277-222	455	No protein	-	lncRNA	-	-
ENST00000823555.1	LINC01277-221	392	No protein	-	lncRNA	-	-
ENST00000823547.1	LINC01277-213	228	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 935 bps,

Version

ENST00000668463.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000668463.1 LINC01277-210

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Transcript: ENST00000668463.1 LINC01277-210

Summary

About Us

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