Transcript: ENST00000668541.2 LINC01128-225

Description

long intergenic non-protein coding RNA 1128 [Source:HGNC Symbol;Acc:HGNC:49377]

Gene Synonyms

RP11-206L10.11

Location

Chromosome 1: 827,762-842,001 forward strand.

About this transcript

This transcript has 3 exons and maps to 272 oligo probes.

Gene

This transcript is a product of gene ENSG00000228794.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000425657.1	LINC01128-203	845	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000666741.3	LINC01128-223	5819	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000670780.1	LINC01128-227	8389	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000445118.7	LINC01128-205	6616	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000659124.3	LINC01128-219	5639	No protein	-	lncRNA	-	-
ENST00000669922.2	LINC01128-226	5504	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000685764.3	LINC01128-232	3838	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000691234.3	LINC01128-238	3108	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000701768.1	LINC01128-242	3097	No protein	-	lncRNA	-	-
ENST00000688309.1	LINC01128-236	3094	No protein	-	lncRNA	-	-
ENST00000691316.1	LINC01128-239	3092	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000657837.1	LINC01128-217	2933	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000661463.2	LINC01128-222	2703	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000671208.1	LINC01128-229	2509	No protein	-	lncRNA	-	-
ENST00000670824.1	LINC01128-228	2495	No protein	-	lncRNA	-	-
ENST00000416570.7	LINC01128-202	2446	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000658846.2	LINC01128-218	2257	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000744884.1	LINC01128-266	2146	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000685879.3	LINC01128-233	2086	No protein	-	lncRNA	-	-
ENST00000610067.8	LINC01128-211	2066	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000686238.2	LINC01128-234	1978	No protein	-	lncRNA	-	-
ENST00000609009.6	LINC01128-209	1932	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000688008.3	LINC01128-235	1886	No protein	-	lncRNA	-	-
ENST00000661237.3	LINC01128-221	1859	No protein	-	lncRNA	-	-
ENST00000745642.1	LINC01128-289	1804	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000667414.2	LINC01128-224	1789	No protein	-	lncRNA	-	-
ENST00000744874.1	LINC01128-256	1762	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000744878.1	LINC01128-260	1761	No protein	-	lncRNA	-	-
ENST00000744865.1	LINC01128-247	1684	No protein	-	lncRNA	-	-
ENST00000608189.6	LINC01128-208	1660	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000702847.1	LINC01128-246	1651	No protein	-	lncRNA	-	-
ENST00000744888.1	LINC01128-270	1643	No protein	-	lncRNA	-	-
ENST00000449005.8	LINC01128-207	1638	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000744903.1	LINC01128-285	1629	No protein	-	lncRNA	-	-
ENST00000744873.1	LINC01128-255	1615	No protein	-	lncRNA	-	-
ENST00000623808.4	LINC01128-214	1603	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000702098.2	LINC01128-243	1602	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000744883.1	LINC01128-265	1601	No protein	-	lncRNA	-	-
ENST00000744906.1	LINC01128-288	1595	No protein	-	lncRNA	-	-
ENST00000744881.1	LINC01128-263	1570	No protein	-	lncRNA	-	-
ENST00000692194.1	LINC01128-240	1563	No protein	-	lncRNA	-	-
ENST00000657175.1	LINC01128-216	1558	No protein	-	lncRNA	-	-
ENST00000448975.7	LINC01128-206	1531	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000688420.2	LINC01128-237	1524	No protein	-	lncRNA	-	-
ENST00000623070.6	LINC01128-213	1515	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000744869.1	LINC01128-251	1501	No protein	-	lncRNA	-	-
ENST00000744896.1	LINC01128-278	1500	No protein	-	lncRNA	-	-
ENST00000744885.1	LINC01128-267	1497	No protein	-	lncRNA	-	-
ENST00000744882.1	LINC01128-264	1462	No protein	-	lncRNA	-	-
ENST00000702557.2	LINC01128-245	1461	No protein	-	lncRNA	-	-
ENST00000744880.1	LINC01128-262	1459	No protein	-	lncRNA	-	-
ENST00000744904.1	LINC01128-286	1459	No protein	-	lncRNA	-	-
ENST00000685334.2	LINC01128-230	1456	No protein	-	lncRNA	-	-
ENST00000685566.2	LINC01128-231	1449	No protein	-	lncRNA	-	-
ENST00000744886.1	LINC01128-268	1436	No protein	-	lncRNA	-	-
ENST00000744887.1	LINC01128-269	1434	No protein	-	lncRNA	-	-
ENST00000702273.1	LINC01128-244	1432	No protein	-	lncRNA	-	-
ENST00000744895.1	LINC01128-277	1395	No protein	-	lncRNA	-	-
ENST00000744890.1	LINC01128-272	1377	No protein	-	lncRNA	-	-
ENST00000609139.7	LINC01128-210	1376	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000744897.1	LINC01128-279	1357	No protein	-	lncRNA	-	-
ENST00000745643.1	LINC01128-290	1348	No protein	-	lncRNA	-	-
ENST00000744876.1	LINC01128-258	1334	No protein	-	lncRNA	-	-
ENST00000744870.1	LINC01128-252	1329	No protein	-	lncRNA	-	-
ENST00000744871.1	LINC01128-253	1321	No protein	-	lncRNA	-	-
ENST00000701598.2	LINC01128-241	1319	No protein	-	lncRNA	-	-
ENST00000744898.1	LINC01128-280	1319	No protein	-	lncRNA	-	-
ENST00000745645.1	LINC01128-292	1316	No protein	-	lncRNA	-	-
ENST00000745647.1	LINC01128-294	1307	No protein	-	lncRNA	-	-
ENST00000744892.1	LINC01128-274	1295	No protein	-	lncRNA	-	-
ENST00000744868.1	LINC01128-250	1260	No protein	-	lncRNA	-	-
ENST00000744902.1	LINC01128-284	1250	No protein	-	lncRNA	-	-
ENST00000745646.1	LINC01128-293	1245	No protein	-	lncRNA	-	-
ENST00000744877.1	LINC01128-259	1234	No protein	-	lncRNA	-	-
ENST00000744872.1	LINC01128-254	1216	No protein	-	lncRNA	-	-
ENST00000660797.1	LINC01128-220	1215	No protein	-	lncRNA	-	-
ENST00000744866.1	LINC01128-248	1199	No protein	-	lncRNA	-	-
ENST00000744894.1	LINC01128-276	1186	No protein	-	lncRNA	-	-
ENST00000744875.1	LINC01128-257	1182	No protein	-	lncRNA	-	-
ENST00000744867.1	LINC01128-249	1085	No protein	-	lncRNA	-	-
ENST00000744901.1	LINC01128-283	1048	No protein	-	lncRNA	-	-
ENST00000744905.1	LINC01128-287	1008	No protein	-	lncRNA	-	-
ENST00000744900.1	LINC01128-282	997	No protein	-	lncRNA	-	-
ENST00000668541.2	LINC01128-225	996	No protein	-	lncRNA	-	-
ENST00000745648.1	LINC01128-295	974	No protein	-	lncRNA	-	-
ENST00000744889.1	LINC01128-271	960	No protein	-	lncRNA	-	-
ENST00000441765.7	LINC01128-204	943	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000415295.1	LINC01128-201	894	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000745644.1	LINC01128-291	881	No protein	-	lncRNA	-	-
ENST00000622921.1	LINC01128-212	724	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000744893.1	LINC01128-275	714	No protein	-	lncRNA	-	-
ENST00000744899.1	LINC01128-281	678	No protein	-	lncRNA	-	-
ENST00000624927.3	LINC01128-215	677	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000744891.1	LINC01128-273	622	No protein	-	lncRNA	-	-
ENST00000744879.1	LINC01128-261	534	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 996 bps,

Version

ENST00000668541.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000668541.2 LINC01128-225

Summary

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Transcript: ENST00000668541.2 LINC01128-225

Summary

About Us

Get help

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