Transcript: ENST00000422542.4 SNHG26-202

Description

small nucleolar RNA host gene 26 [Source:HGNC Symbol;Acc:HGNC:53131]

Gene Synonyms

AC005682.5

Location

Chromosome 7: 22,854,155-22,861,579 forward strand.

About this transcript

This transcript has 4 exons and maps to 183 oligo probes.

Gene

This transcript is a product of gene ENSG00000228649.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000432668.1	SNHG26-203	574	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000748431.1	SNHG26-223	467	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000415611.10	SNHG26-201	3102	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000748450.1	SNHG26-242	2894	No protein	-	lncRNA	-	-
ENST00000748458.1	SNHG26-250	2099	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000667557.1	SNHG26-212	1743	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000656687.3	SNHG26-205	1421	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000748447.1	SNHG26-239	1389	No protein	-	lncRNA	-	-
ENST00000657608.2	SNHG26-206	1357	No protein	-	lncRNA	-	-
ENST00000748446.1	SNHG26-238	1336	No protein	-	lncRNA	-	-
ENST00000748453.1	SNHG26-245	1322	No protein	-	lncRNA	-	-
ENST00000661582.1	SNHG26-209	1251	No protein	-	lncRNA	-	-
ENST00000702518.1	SNHG26-220	1250	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000422542.4	SNHG26-202	1238	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000688000.3	SNHG26-215	1213	No protein	-	lncRNA	-	-
ENST00000702192.1	SNHG26-219	1164	No protein	-	lncRNA	-	-
ENST00000748437.1	SNHG26-229	1153	No protein	-	lncRNA	-	-
ENST00000748449.1	SNHG26-241	1121	No protein	-	lncRNA	-	-
ENST00000748452.1	SNHG26-244	1110	No protein	-	lncRNA	-	-
ENST00000748462.1	SNHG26-254	1108	No protein	-	lncRNA	-	-
ENST00000702669.1	SNHG26-221	1082	No protein	-	lncRNA	-	-
ENST00000662021.1	SNHG26-210	1075	No protein	-	lncRNA	-	-
ENST00000661147.1	SNHG26-208	1063	No protein	-	lncRNA	-	-
ENST00000656301.2	SNHG26-204	1013	No protein	-	lncRNA	-	-
ENST00000658124.2	SNHG26-207	972	No protein	-	lncRNA	-	-
ENST00000748448.1	SNHG26-240	962	No protein	-	lncRNA	-	-
ENST00000748438.1	SNHG26-230	956	No protein	-	lncRNA	-	-
ENST00000689892.2	SNHG26-216	927	No protein	-	lncRNA	-	-
ENST00000663057.2	SNHG26-211	922	No protein	-	lncRNA	-	-
ENST00000748457.1	SNHG26-249	894	No protein	-	lncRNA	-	-
ENST00000748443.1	SNHG26-235	873	No protein	-	lncRNA	-	-
ENST00000671680.2	SNHG26-213	858	No protein	-	lncRNA	-	-
ENST00000690219.3	SNHG26-217	830	No protein	-	lncRNA	-	-
ENST00000748439.1	SNHG26-231	801	No protein	-	lncRNA	-	-
ENST00000748435.1	SNHG26-227	745	No protein	-	lncRNA	-	-
ENST00000748456.1	SNHG26-248	744	No protein	-	lncRNA	-	-
ENST00000748455.1	SNHG26-247	736	No protein	-	lncRNA	-	-
ENST00000748454.1	SNHG26-246	678	No protein	-	lncRNA	-	-
ENST00000691516.2	SNHG26-218	677	No protein	-	lncRNA	-	-
ENST00000702874.1	SNHG26-222	672	No protein	-	lncRNA	-	-
ENST00000748433.1	SNHG26-225	665	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000685098.3	SNHG26-214	653	No protein	-	lncRNA	-	-
ENST00000748445.1	SNHG26-237	650	No protein	-	lncRNA	-	-
ENST00000748441.1	SNHG26-233	624	No protein	-	lncRNA	-	-
ENST00000748442.1	SNHG26-234	602	No protein	-	lncRNA	-	-
ENST00000748451.1	SNHG26-243	579	No protein	-	lncRNA	-	-
ENST00000748440.1	SNHG26-232	539	No protein	-	lncRNA	-	-
ENST00000748432.1	SNHG26-224	524	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000748444.1	SNHG26-236	510	No protein	-	lncRNA	-	-
ENST00000748434.1	SNHG26-226	498	No protein	-	lncRNA	-	-
ENST00000748460.1	SNHG26-252	496	No protein	-	lncRNA	-	-
ENST00000748436.1	SNHG26-228	390	No protein	-	lncRNA	-	-
ENST00000748461.1	SNHG26-253	294	No protein	-	lncRNA	-	-
ENST00000748459.1	SNHG26-251	291	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,238 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000422542.4

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Annotation Attributes

nested 454 RNA-Seq supported [Definitions]

3' nested supported extension

Transcript: ENST00000422542.4 SNHG26-202

Summary

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Transcript: ENST00000422542.4 SNHG26-202

Summary

About Us

Get help

Our sister sites

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