Transcript: ENST00000667783.2 LINC01635-206

Description

long intergenic non-protein coding RNA 1635 [Source:HGNC Symbol;Acc:HGNC:52422]

Location

Chromosome 1: 22,023,948-22,025,483 reverse strand.

About this transcript

This transcript has 2 exons and maps to 176 oligo probes.

Gene

This transcript is a product of gene ENSG00000228397.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000774637.1	LINC01635-207	663	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000655655.1	LINC01635-204	1470	No protein	-	lncRNA	-	-
ENST00000667783.2	LINC01635-206	1176	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000655353.1	LINC01635-203	1039	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000635097.3	LINC01635-202	1039	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000657670.2	LINC01635-205	1016	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000774643.1	LINC01635-213	831	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000774642.1	LINC01635-212	728	No protein	-	lncRNA	-	-
ENST00000774639.1	LINC01635-209	712	No protein	-	lncRNA	-	-
ENST00000455966.2	LINC01635-201	702	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000774645.1	LINC01635-215	662	No protein	-	lncRNA	-	-
ENST00000774641.1	LINC01635-211	600	No protein	-	lncRNA	-	-
ENST00000774638.1	LINC01635-208	586	No protein	-	lncRNA	-	-
ENST00000774647.1	LINC01635-217	543	No protein	-	lncRNA	-	-
ENST00000774640.1	LINC01635-210	479	No protein	-	lncRNA	-	-
ENST00000774644.1	LINC01635-214	477	No protein	-	lncRNA	-	-
ENST00000774646.1	LINC01635-216	375	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 1,176 bps,

Version

ENST00000667783.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000667783.2 LINC01635-206

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Transcript: ENST00000667783.2 LINC01635-206

Summary

About Us

Get help

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