Transcript: ENST00000625080.1 MIR646HG-212

Description

MIR646 host gene [Source:HGNC Symbol;Acc:HGNC:27659]

Location

Chromosome 20: 60,055,925-60,072,953 forward strand.

About this transcript

This transcript has 4 exons and maps to 262 oligo probes.

Gene

This transcript is a product of gene ENSG00000228340.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000659856.1	MIR646HG-240	3592	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000665017.2	MIR646HG-263	4120	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000663127.1	MIR646HG-254	3615	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000625080.1	MIR646HG-212	2732	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000660831.1	MIR646HG-245	2727	No protein	-	lncRNA	-	-
ENST00000661179.1	MIR646HG-248	2087	No protein	-	lncRNA	-	-
ENST00000432910.5	MIR646HG-207	2043	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000839644.1	MIR646HG-336	2007	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000660093.2	MIR646HG-243	1993	No protein	-	lncRNA	-	-
ENST00000667581.1	MIR646HG-268	1908	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000654960.1	MIR646HG-225	1894	No protein	-	lncRNA	-	-
ENST00000653415.1	MIR646HG-215	1846	No protein	-	lncRNA	-	-
ENST00000653739.1	MIR646HG-217	1712	No protein	-	lncRNA	-	-
ENST00000663620.1	MIR646HG-256	1710	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000655034.1	MIR646HG-226	1691	No protein	-	lncRNA	-	-
ENST00000657582.1	MIR646HG-234	1688	No protein	-	lncRNA	-	-
ENST00000664219.1	MIR646HG-259	1656	No protein	-	lncRNA	-	-
ENST00000661019.1	MIR646HG-247	1645	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000662972.1	MIR646HG-252	1622	No protein	-	lncRNA	-	-
ENST00000654943.1	MIR646HG-224	1599	No protein	-	lncRNA	-	-
ENST00000671305.1	MIR646HG-273	1564	No protein	-	lncRNA	-	-
ENST00000839649.1	MIR646HG-341	1552	No protein	-	lncRNA	-	-
ENST00000658147.1	MIR646HG-236	1539	No protein	-	lncRNA	-	-
ENST00000664016.1	MIR646HG-257	1527	No protein	-	lncRNA	-	-
ENST00000661569.1	MIR646HG-249	1503	No protein	-	lncRNA	-	-
ENST00000656658.1	MIR646HG-231	1502	No protein	-	lncRNA	-	-
ENST00000657952.1	MIR646HG-235	1482	No protein	-	lncRNA	-	-
ENST00000692368.2	MIR646HG-280	1425	No protein	-	lncRNA	-	-
ENST00000654038.1	MIR646HG-219	1422	No protein	-	lncRNA	-	-
ENST00000664403.1	MIR646HG-261	1387	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000839597.1	MIR646HG-289	1363	No protein	-	lncRNA	-	-
ENST00000686863.2	MIR646HG-276	1362	No protein	-	lncRNA	-	-
ENST00000664414.1	MIR646HG-262	1336	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000839627.1	MIR646HG-319	1294	No protein	-	lncRNA	-	-
ENST00000839637.1	MIR646HG-329	1293	No protein	-	lncRNA	-	-
ENST00000691246.3	MIR646HG-279	1284	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000685502.2	MIR646HG-275	1282	No protein	-	lncRNA	-	-
ENST00000668055.1	MIR646HG-270	1271	No protein	-	lncRNA	-	-
ENST00000665114.1	MIR646HG-264	1250	No protein	-	lncRNA	-	-
ENST00000687520.1	MIR646HG-277	1249	No protein	-	lncRNA	-	-
ENST00000654422.1	MIR646HG-223	1232	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000657541.1	MIR646HG-233	1206	No protein	-	lncRNA	-	-
ENST00000654397.1	MIR646HG-222	1142	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000839626.1	MIR646HG-318	1139	No protein	-	lncRNA	-	-
ENST00000653814.1	MIR646HG-218	1086	No protein	-	lncRNA	-	-
ENST00000659494.1	MIR646HG-238	1085	No protein	-	lncRNA	-	-
ENST00000663582.1	MIR646HG-255	1080	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000839647.1	MIR646HG-339	1056	No protein	-	lncRNA	-	-
ENST00000660970.1	MIR646HG-246	1055	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000839609.1	MIR646HG-301	1040	No protein	-	lncRNA	-	-
ENST00000654258.1	MIR646HG-220	1023	No protein	-	lncRNA	-	-
ENST00000664304.1	MIR646HG-260	1020	No protein	-	lncRNA	-	-
ENST00000667664.1	MIR646HG-269	1017	No protein	-	lncRNA	-	-
ENST00000839642.1	MIR646HG-334	1011	No protein	-	lncRNA	-	-
ENST00000667249.1	MIR646HG-267	998	No protein	-	lncRNA	-	-
ENST00000839608.1	MIR646HG-300	994	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000839620.1	MIR646HG-312	987	No protein	-	lncRNA	-	-
ENST00000816687.1	MIR646HG-288	979	No protein	-	lncRNA	-	-
ENST00000839610.1	MIR646HG-302	972	No protein	-	lncRNA	-	-
ENST00000816686.1	MIR646HG-287	969	No protein	-	lncRNA	-	-
ENST00000660397.1	MIR646HG-244	959	No protein	-	lncRNA	-	-
ENST00000666811.1	MIR646HG-266	954	No protein	-	lncRNA	-	-
ENST00000839615.1	MIR646HG-307	922	No protein	-	lncRNA	-	-
ENST00000701578.1	MIR646HG-282	912	No protein	-	lncRNA	-	-
ENST00000839652.1	MIR646HG-344	906	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000839622.1	MIR646HG-314	899	No protein	-	lncRNA	-	-
ENST00000839614.1	MIR646HG-306	882	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000839668.1	MIR646HG-360	882	No protein	-	lncRNA	-	-
ENST00000839651.1	MIR646HG-343	880	No protein	-	lncRNA	-	-
ENST00000660044.1	MIR646HG-242	874	No protein	-	lncRNA	-	-
ENST00000665518.2	MIR646HG-265	871	No protein	-	lncRNA	-	-
ENST00000426753.7	MIR646HG-202	869	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000457508.2	MIR646HG-210	866	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000431181.5	MIR646HG-206	858	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000668275.1	MIR646HG-271	856	No protein	-	lncRNA	-	-
ENST00000839666.1	MIR646HG-358	839	No protein	-	lncRNA	-	-
ENST00000839662.1	MIR646HG-354	836	No protein	-	lncRNA	-	-
ENST00000655737.2	MIR646HG-228	827	No protein	-	lncRNA	-	-
ENST00000421257.1	MIR646HG-201	825	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000839613.1	MIR646HG-305	815	No protein	-	lncRNA	-	-
ENST00000427820.1	MIR646HG-204	805	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000663065.1	MIR646HG-253	801	No protein	-	lncRNA	-	-
ENST00000654306.2	MIR646HG-221	800	No protein	-	lncRNA	-	-
ENST00000839661.1	MIR646HG-353	798	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000839616.1	MIR646HG-308	793	No protein	-	lncRNA	-	-
ENST00000839635.1	MIR646HG-327	782	No protein	-	lncRNA	-	-
ENST00000839617.1	MIR646HG-309	779	No protein	-	lncRNA	-	-
ENST00000839638.1	MIR646HG-330	774	No protein	-	lncRNA	-	-
ENST00000839648.1	MIR646HG-340	774	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000647608.3	MIR646HG-213	773	No protein	-	lncRNA	-	-
ENST00000839624.1	MIR646HG-316	767	No protein	-	lncRNA	-	-
ENST00000657038.1	MIR646HG-232	752	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000839632.1	MIR646HG-324	748	No protein	-	lncRNA	-	-
ENST00000839646.1	MIR646HG-338	745	No protein	-	lncRNA	-	-
ENST00000655544.2	MIR646HG-227	742	No protein	-	lncRNA	-	-
ENST00000839643.1	MIR646HG-335	732	No protein	-	lncRNA	-	-
ENST00000662456.2	MIR646HG-250	722	No protein	-	lncRNA	-	-
ENST00000439507.7	MIR646HG-209	717	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000839598.1	MIR646HG-290	716	No protein	-	lncRNA	-	-
ENST00000839664.1	MIR646HG-356	714	No protein	-	lncRNA	-	-
ENST00000839667.1	MIR646HG-359	712	No protein	-	lncRNA	-	-
ENST00000839619.1	MIR646HG-311	710	No protein	-	lncRNA	-	-
ENST00000839621.1	MIR646HG-313	710	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000839645.1	MIR646HG-337	708	No protein	-	lncRNA	-	-
ENST00000839607.1	MIR646HG-299	701	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000662790.2	MIR646HG-251	696	No protein	-	lncRNA	-	-
ENST00000664147.1	MIR646HG-258	691	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000655816.1	MIR646HG-229	681	No protein	-	lncRNA	-	-
ENST00000659500.1	MIR646HG-239	669	No protein	-	lncRNA	-	-
ENST00000671388.2	MIR646HG-274	667	No protein	-	lncRNA	-	-
ENST00000839658.1	MIR646HG-350	667	No protein	-	lncRNA	-	-
ENST00000652813.1	MIR646HG-214	662	No protein	-	lncRNA	-	-
ENST00000659996.2	MIR646HG-241	660	No protein	-	lncRNA	-	-
ENST00000839639.1	MIR646HG-331	660	No protein	-	lncRNA	-	-
ENST00000656236.2	MIR646HG-230	656	No protein	-	lncRNA	-	-
ENST00000839665.1	MIR646HG-357	651	No protein	-	lncRNA	-	-
ENST00000668954.1	MIR646HG-272	617	No protein	-	lncRNA	-	-
ENST00000839656.1	MIR646HG-348	610	No protein	-	lncRNA	-	-
ENST00000839657.1	MIR646HG-349	605	No protein	-	lncRNA	-	-
ENST00000839611.1	MIR646HG-303	598	No protein	-	lncRNA	-	-
ENST00000690445.3	MIR646HG-278	596	No protein	-	lncRNA	-	-
ENST00000839655.1	MIR646HG-347	592	No protein	-	lncRNA	-	-
ENST00000458422.6	MIR646HG-211	589	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000839612.1	MIR646HG-304	589	No protein	-	lncRNA	-	-
ENST00000839663.1	MIR646HG-355	587	No protein	-	lncRNA	-	-
ENST00000658620.1	MIR646HG-237	585	No protein	-	lncRNA	-	-
ENST00000816685.1	MIR646HG-286	568	No protein	-	lncRNA	-	-
ENST00000839618.1	MIR646HG-310	568	No protein	-	lncRNA	-	-
ENST00000428772.6	MIR646HG-205	564	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000839660.1	MIR646HG-352	560	No protein	-	lncRNA	-	-
ENST00000839654.1	MIR646HG-346	556	No protein	-	lncRNA	-	-
ENST00000839623.1	MIR646HG-315	549	No protein	-	lncRNA	-	-
ENST00000839602.1	MIR646HG-294	543	No protein	-	lncRNA	-	-
ENST00000427691.5	MIR646HG-203	534	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000715828.1	MIR646HG-283	533	No protein	-	lncRNA	-	-
ENST00000745816.1	MIR646HG-284	516	No protein	-	lncRNA	-	-
ENST00000839659.1	MIR646HG-351	511	No protein	-	lncRNA	-	-
ENST00000437035.5	MIR646HG-208	499	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000839636.1	MIR646HG-328	493	No protein	-	lncRNA	-	-
ENST00000839633.1	MIR646HG-325	491	No protein	-	lncRNA	-	-
ENST00000653451.1	MIR646HG-216	480	No protein	-	lncRNA	-	-
ENST00000839650.1	MIR646HG-342	475	No protein	-	lncRNA	-	-
ENST00000839653.1	MIR646HG-345	469	No protein	-	lncRNA	-	-
ENST00000839630.1	MIR646HG-322	467	No protein	-	lncRNA	-	-
ENST00000839606.1	MIR646HG-298	459	No protein	-	lncRNA	-	-
ENST00000839599.1	MIR646HG-291	455	No protein	-	lncRNA	-	-
ENST00000839625.1	MIR646HG-317	450	No protein	-	lncRNA	-	-
ENST00000839603.1	MIR646HG-295	449	No protein	-	lncRNA	-	-
ENST00000839631.1	MIR646HG-323	435	No protein	-	lncRNA	-	-
ENST00000701068.2	MIR646HG-281	430	No protein	-	lncRNA	-	-
ENST00000839605.1	MIR646HG-297	427	No protein	-	lncRNA	-	-
ENST00000839628.1	MIR646HG-320	420	No protein	-	lncRNA	-	-
ENST00000810784.1	MIR646HG-285	414	No protein	-	lncRNA	-	-
ENST00000839600.1	MIR646HG-292	407	No protein	-	lncRNA	-	-
ENST00000839601.1	MIR646HG-293	402	No protein	-	lncRNA	-	-
ENST00000839640.1	MIR646HG-332	398	No protein	-	lncRNA	-	-
ENST00000839604.1	MIR646HG-296	395	No protein	-	lncRNA	-	-
ENST00000839629.1	MIR646HG-321	394	No protein	-	lncRNA	-	-
ENST00000839634.1	MIR646HG-326	362	No protein	-	lncRNA	-	-
ENST00000839669.1	MIR646HG-361	284	No protein	-	lncRNA	-	-
ENST00000839641.1	MIR646HG-333	266	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 2,732 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000625080.1

Type

LncRNA

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000625080.1 MIR646HG-212

Summary

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Transcript: ENST00000625080.1 MIR646HG-212

Summary

About Us

Get help

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