Transcript: ENST00000661311.2 LINC00354-205

Description

long intergenic non-protein coding RNA 354 [Source:HGNC Symbol;Acc:HGNC:42672]

Location

Chromosome 13: 111,893,439-111,901,081 forward strand.

About this transcript

This transcript has 4 exons and maps to 282 oligo probes.

Gene

This transcript is a product of gene ENSG00000226903.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000663211.1	LINC00354-207	1193	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000661311.2	LINC00354-205	1531	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000662993.2	LINC00354-206	1520	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000670406.1	LINC00354-210	1108	No protein	-	lncRNA	-	-
ENST00000817496.1	LINC00354-213	1042	No protein	-	lncRNA	-	-
ENST00000655071.2	LINC00354-203	995	No protein	-	lncRNA	-	-
ENST00000817500.1	LINC00354-214	979	No protein	-	lncRNA	-	-
ENST00000817507.1	LINC00354-217	816	No protein	-	lncRNA	-	-
ENST00000700859.2	LINC00354-212	748	No protein	-	lncRNA	-	-
ENST00000817505.1	LINC00354-216	735	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000668961.2	LINC00354-209	708	No protein	-	lncRNA	-	-
ENST00000817516.1	LINC00354-223	707	No protein	-	lncRNA	-	-
ENST00000655663.2	LINC00354-204	673	No protein	-	lncRNA	-	-
ENST00000817515.1	LINC00354-222	640	No protein	-	lncRNA	-	-
ENST00000670855.2	LINC00354-211	639	No protein	-	lncRNA	-	-
ENST00000817517.1	LINC00354-224	552	No protein	-	lncRNA	-	-
ENST00000817509.1	LINC00354-218	535	No protein	-	lncRNA	-	-
ENST00000817514.1	LINC00354-221	500	No protein	-	lncRNA	-	-
ENST00000664504.1	LINC00354-208	492	No protein	-	lncRNA	-	-
ENST00000817511.1	LINC00354-219	473	No protein	-	lncRNA	-	-
ENST00000817503.1	LINC00354-215	451	No protein	-	lncRNA	-	-
ENST00000817512.1	LINC00354-220	403	No protein	-	lncRNA	-	-
ENST00000440860.1	LINC00354-202	376	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000412119.1	LINC00354-201	347	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,531 bps,

Version

ENST00000661311.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000661311.2 LINC00354-205

Summary

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Transcript: ENST00000661311.2 LINC00354-205

Summary

About Us

Get help

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