Transcript: ENST00000671423.1 LINC00331-210

Description

long intergenic non-protein coding RNA 331 [Source:HGNC Symbol;Acc:HGNC:42048]

Gene Synonyms

NCRNA00331

Location

Chromosome 13: 78,786,476-78,840,049 reverse strand.

About this transcript

This transcript has 7 exons and maps to 172 oligo probes.

Gene

This transcript is a product of gene ENSG00000225427.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000667185.1	LINC00331-208	993	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000671423.1	LINC00331-210	1051	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000658469.1	LINC00331-205	1001	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000829813.1	LINC00331-222	1000	No protein	-	lncRNA	-	-
ENST00000670423.2	LINC00331-209	946	No protein	-	lncRNA	-	-
ENST00000829805.1	LINC00331-214	943	No protein	-	lncRNA	-	-
ENST00000655539.2	LINC00331-204	930	No protein	-	lncRNA	-	-
ENST00000829809.1	LINC00331-218	927	No protein	-	lncRNA	-	-
ENST00000829808.1	LINC00331-217	913	No protein	-	lncRNA	-	-
ENST00000829806.1	LINC00331-215	908	No protein	-	lncRNA	-	-
ENST00000829803.1	LINC00331-212	893	No protein	-	lncRNA	-	-
ENST00000829811.1	LINC00331-220	832	No protein	-	lncRNA	-	-
ENST00000653901.1	LINC00331-202	814	No protein	-	lncRNA	-	-
ENST00000666610.2	LINC00331-206	806	No protein	-	lncRNA	-	-
ENST00000829812.1	LINC00331-221	763	No protein	-	lncRNA	-	-
ENST00000829810.1	LINC00331-219	720	No protein	-	lncRNA	-	-
ENST00000667073.2	LINC00331-207	681	No protein	-	lncRNA	-	-
ENST00000829814.1	LINC00331-223	641	No protein	-	lncRNA	-	-
ENST00000829804.1	LINC00331-213	630	No protein	-	lncRNA	-	-
ENST00000829802.1	LINC00331-211	619	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000829817.1	LINC00331-226	598	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000829807.1	LINC00331-216	502	No protein	-	lncRNA	-	-
ENST00000829820.1	LINC00331-229	469	No protein	-	lncRNA	-	-
ENST00000654452.2	LINC00331-203	414	No protein	-	lncRNA	-	-
ENST00000829815.1	LINC00331-224	403	No protein	-	lncRNA	-	-
ENST00000829816.1	LINC00331-225	403	No protein	-	lncRNA	-	-
ENST00000446391.1	LINC00331-201	376	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000829821.1	LINC00331-230	329	No protein	-	lncRNA	-	-
ENST00000829818.1	LINC00331-227	294	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000829819.1	LINC00331-228	234	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 1,051 bps,

Version

ENST00000671423.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000671423.1 LINC00331-210

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Transcript: ENST00000671423.1 LINC00331-210

Summary

About Us

Get help

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