Transcript: ENST00000660653.1 LINC01886-204

Description

long intergenic non-protein coding RNA 1886 [Source:HGNC Symbol;Acc:HGNC:52705]

Location

Chromosome 2: 107,529,292-107,556,499 forward strand.

About this transcript

This transcript has 4 exons, is associated with 13252 variant alleles and maps to 130 oligo probes.

Gene

This transcript is a product of gene ENSG00000224568.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000660653.1	LINC01886-204	1654	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000669483.2	LINC01886-208	1884	No protein	-	lncRNA	-	-
ENST00000658627.2	LINC01886-203	1717	No protein	-	lncRNA	-	-
ENST00000665591.1	LINC01886-206	1713	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000662038.1	LINC01886-205	1587	No protein	-	lncRNA	-	-
ENST00000443205.2	LINC01886-202	1548	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000666630.2	LINC01886-207	886	No protein	-	lncRNA	-	-
ENST00000767984.1	LINC01886-210	784	No protein	-	lncRNA	-	-
ENST00000767985.1	LINC01886-211	690	No protein	-	lncRNA	-	-
ENST00000439893.1	LINC01886-201	580	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000767983.1	LINC01886-209	527	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,654 bps,

Version

ENST00000660653.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Transcript: ENST00000660653.1 LINC01886-204

Summary

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Transcript: ENST00000660653.1 LINC01886-204

Summary

About Us

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