Transcript: ENST00000450044.1 CHROMR-205

Description

cholesterol induced regulator of metabolism RNA [Source:HGNC Symbol;Acc:HGNC:54059]

Gene Synonyms

CHROME, PRKRA-AS1

Location

Chromosome 2: 178,413,968-178,431,341 forward strand.

About this transcript

This transcript has 4 exons and maps to 245 oligo probes.

Gene

This transcript is a product of gene ENSG00000223960.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000723111.1	CHROMR-236	812	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000665039.2	CHROMR-213	5673	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000666480.1	CHROMR-214	2925	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000663803.2	CHROMR-212	2863	No protein	-	lncRNA	-	-
ENST00000453026.7	CHROMR-206	2366	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000701883.2	CHROMR-230	1998	No protein	-	lncRNA	-	-
ENST00000686412.2	CHROMR-219	1984	No protein	-	lncRNA	-	-
ENST00000668138.1	CHROMR-215	1908	No protein	-	lncRNA	-	-
ENST00000692047.1	CHROMR-226	1902	No protein	-	lncRNA	-	-
ENST00000671679.1	CHROMR-217	1765	No protein	-	lncRNA	-	-
ENST00000723116.1	CHROMR-241	1715	No protein	-	lncRNA	-	-
ENST00000723117.1	CHROMR-242	1703	No protein	-	lncRNA	-	-
ENST00000701929.2	CHROMR-231	1670	No protein	-	lncRNA	-	-
ENST00000702767.2	CHROMR-235	1582	No protein	-	lncRNA	-	-
ENST00000659708.3	CHROMR-208	1576	No protein	-	lncRNA	-	-
ENST00000660374.1	CHROMR-209	1545	No protein	-	lncRNA	-	-
ENST00000723122.1	CHROMR-247	1542	No protein	-	lncRNA	-	-
ENST00000454488.8	CHROMR-207	1510	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000691078.3	CHROMR-223	1435	No protein	-	lncRNA	-	-
ENST00000662743.1	CHROMR-211	1392	No protein	-	lncRNA	-	-
ENST00000671256.1	CHROMR-216	1379	No protein	-	lncRNA	-	-
ENST00000436616.5	CHROMR-203	1370	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000723125.1	CHROMR-250	1348	No protein	-	lncRNA	-	-
ENST00000661271.3	CHROMR-210	1324	No protein	-	lncRNA	-	-
ENST00000723123.1	CHROMR-248	1276	No protein	-	lncRNA	-	-
ENST00000723118.1	CHROMR-243	1143	No protein	-	lncRNA	-	-
ENST00000723115.1	CHROMR-240	1139	No protein	-	lncRNA	-	-
ENST00000701496.2	CHROMR-229	1134	No protein	-	lncRNA	-	-
ENST00000723148.1	CHROMR-273	1127	No protein	-	lncRNA	-	-
ENST00000702484.2	CHROMR-233	1121	No protein	-	lncRNA	-	-
ENST00000702755.1	CHROMR-234	1098	No protein	-	lncRNA	-	-
ENST00000723121.1	CHROMR-246	1090	No protein	-	lncRNA	-	-
ENST00000684892.1	CHROMR-218	1069	No protein	-	lncRNA	-	-
ENST00000723120.1	CHROMR-245	1051	No protein	-	lncRNA	-	-
ENST00000688877.2	CHROMR-221	1050	No protein	-	lncRNA	-	-
ENST00000723132.1	CHROMR-257	1042	No protein	-	lncRNA	-	-
ENST00000690483.1	CHROMR-222	995	No protein	-	lncRNA	-	-
ENST00000701108.2	CHROMR-228	974	No protein	-	lncRNA	-	-
ENST00000723113.1	CHROMR-238	969	No protein	-	lncRNA	-	-
ENST00000723114.1	CHROMR-239	959	No protein	-	lncRNA	-	-
ENST00000723135.1	CHROMR-260	936	No protein	-	lncRNA	-	-
ENST00000702167.2	CHROMR-232	935	No protein	-	lncRNA	-	-
ENST00000723112.1	CHROMR-237	931	No protein	-	lncRNA	-	-
ENST00000691493.2	CHROMR-224	915	No protein	-	lncRNA	-	-
ENST00000723124.1	CHROMR-249	904	No protein	-	lncRNA	-	-
ENST00000723127.1	CHROMR-252	892	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000700940.2	CHROMR-227	871	No protein	-	lncRNA	-	-
ENST00000723145.1	CHROMR-270	854	No protein	-	lncRNA	-	-
ENST00000723133.1	CHROMR-258	852	No protein	-	lncRNA	-	-
ENST00000691722.1	CHROMR-225	850	No protein	-	lncRNA	-	-
ENST00000723119.1	CHROMR-244	844	No protein	-	lncRNA	-	-
ENST00000723130.1	CHROMR-255	839	No protein	-	lncRNA	-	-
ENST00000723141.1	CHROMR-266	833	No protein	-	lncRNA	-	-
ENST00000420672.2	CHROMR-202	824	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000688261.3	CHROMR-220	820	No protein	-	lncRNA	-	-
ENST00000723134.1	CHROMR-259	810	No protein	-	lncRNA	-	-
ENST00000723129.1	CHROMR-254	805	No protein	-	lncRNA	-	-
ENST00000415236.2	CHROMR-201	802	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000450044.1	CHROMR-205	793	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000723140.1	CHROMR-265	779	No protein	-	lncRNA	-	-
ENST00000723147.1	CHROMR-272	778	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000723138.1	CHROMR-263	767	No protein	-	lncRNA	-	-
ENST00000442036.2	CHROMR-204	758	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000723142.1	CHROMR-267	736	No protein	-	lncRNA	-	-
ENST00000723126.1	CHROMR-251	711	No protein	-	lncRNA	-	-
ENST00000723144.1	CHROMR-269	703	No protein	-	lncRNA	-	-
ENST00000723139.1	CHROMR-264	685	No protein	-	lncRNA	-	-
ENST00000723131.1	CHROMR-256	673	No protein	-	lncRNA	-	-
ENST00000723149.1	CHROMR-274	670	No protein	-	lncRNA	-	-
ENST00000723137.1	CHROMR-262	654	No protein	-	lncRNA	-	-
ENST00000723128.1	CHROMR-253	600	No protein	-	lncRNA	-	-
ENST00000723146.1	CHROMR-271	580	No protein	-	lncRNA	-	-
ENST00000723143.1	CHROMR-268	564	No protein	-	lncRNA	-	-
ENST00000723150.1	CHROMR-275	528	No protein	-	lncRNA	-	-
ENST00000723136.1	CHROMR-261	522	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 793 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000450044.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000450044.1 CHROMR-205

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENST00000450044.1 CHROMR-205

Summary

About Us

Get help

Our sister sites

Follow us