Transcript: ENST00000670319.1 LINC02649-205

Description

long intergenic non-protein coding RNA 2649 [Source:HGNC Symbol;Acc:HGNC:54134]

Location

Chromosome 10: 6,330,618-6,335,976 forward strand.

About this transcript

This transcript has 3 exons and maps to 186 oligo probes.

Gene

This transcript is a product of gene ENSG00000215244.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000783921.1	LINC02649-208	629	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000399868.2	LINC02649-201	3086	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000670683.2	LINC02649-206	2225	No protein	-	lncRNA	-	-
ENST00000670319.1	LINC02649-205	1743	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000659311.1	LINC02649-202	1543	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000664595.1	LINC02649-204	1324	No protein	-	lncRNA	-	-
ENST00000660179.1	LINC02649-203	1209	No protein	-	lncRNA	-	-
ENST00000783926.1	LINC02649-213	1108	No protein	-	lncRNA	-	-
ENST00000783927.1	LINC02649-214	1093	No protein	-	lncRNA	-	-
ENST00000783925.1	LINC02649-212	918	No protein	-	lncRNA	-	-
ENST00000783930.1	LINC02649-217	912	No protein	-	lncRNA	-	-
ENST00000783931.1	LINC02649-218	892	No protein	-	lncRNA	-	-
ENST00000689295.1	LINC02649-207	722	No protein	-	lncRNA	-	-
ENST00000783923.1	LINC02649-210	652	No protein	-	lncRNA	-	-
ENST00000783929.1	LINC02649-216	628	No protein	-	lncRNA	-	-
ENST00000783922.1	LINC02649-209	550	No protein	-	lncRNA	-	-
ENST00000783932.1	LINC02649-219	493	No protein	-	lncRNA	-	-
ENST00000783928.1	LINC02649-215	364	No protein	-	lncRNA	-	-
ENST00000783924.1	LINC02649-211	321	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,743 bps,

Version

ENST00000670319.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000670319.1 LINC02649-205

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Transcript: ENST00000670319.1 LINC02649-205

Summary

About Us

Get help

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