Transcript: ENST00000305709.6 FAM88B-201

Description

family with sequence similarity 88 member B [Source:HGNC Symbol;Acc:HGNC:31457]

Location

Chromosome 9: 62,897,349-62,900,104 forward strand.

About this transcript

This transcript has 2 exons and maps to 973 oligo probes.

Gene

This transcript is a product of gene ENSG00000170161.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000848707.1	FAM88B-207	798	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000305709.6	FAM88B-201	2641	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000848736.1	FAM88B-236	2617	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000661415.2	FAM88B-205	2310	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000671425.2	FAM88B-206	2198	No protein	-	lncRNA	-	-
ENST00000476224.3	FAM88B-203	1923	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000848710.1	FAM88B-210	1818	No protein	-	lncRNA	-	-
ENST00000848711.1	FAM88B-211	1804	No protein	-	lncRNA	-	-
ENST00000848714.1	FAM88B-214	1791	No protein	-	lncRNA	-	-
ENST00000848709.1	FAM88B-209	1569	No protein	-	lncRNA	-	-
ENST00000848720.1	FAM88B-220	1464	No protein	-	lncRNA	-	-
ENST00000848713.1	FAM88B-213	1458	No protein	-	lncRNA	-	-
ENST00000848739.1	FAM88B-239	1440	No protein	-	lncRNA	-	-
ENST00000848721.1	FAM88B-221	1434	No protein	-	lncRNA	-	-
ENST00000655734.1	FAM88B-204	1420	No protein	-	lncRNA	-	-
ENST00000467494.3	FAM88B-202	1419	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000848749.1	FAM88B-249	1367	No protein	-	lncRNA	-	-
ENST00000848712.1	FAM88B-212	1347	No protein	-	lncRNA	-	-
ENST00000848733.1	FAM88B-233	1131	No protein	-	lncRNA	-	-
ENST00000848708.1	FAM88B-208	1107	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000848734.1	FAM88B-234	995	No protein	-	lncRNA	-	-
ENST00000848724.1	FAM88B-224	942	No protein	-	lncRNA	-	-
ENST00000848745.1	FAM88B-245	930	No protein	-	lncRNA	-	-
ENST00000848735.1	FAM88B-235	903	No protein	-	lncRNA	-	-
ENST00000848732.1	FAM88B-232	897	No protein	-	lncRNA	-	-
ENST00000848722.1	FAM88B-222	895	No protein	-	lncRNA	-	-
ENST00000848743.1	FAM88B-243	841	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000848723.1	FAM88B-223	827	No protein	-	lncRNA	-	-
ENST00000848748.1	FAM88B-248	812	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000848728.1	FAM88B-228	793	No protein	-	lncRNA	-	-
ENST00000848726.1	FAM88B-226	784	No protein	-	lncRNA	-	-
ENST00000848727.1	FAM88B-227	748	No protein	-	lncRNA	-	-
ENST00000848716.1	FAM88B-216	735	No protein	-	lncRNA	-	-
ENST00000848750.1	FAM88B-250	711	No protein	-	lncRNA	-	-
ENST00000848718.1	FAM88B-218	688	No protein	-	lncRNA	-	-
ENST00000848738.1	FAM88B-238	686	No protein	-	lncRNA	-	-
ENST00000848725.1	FAM88B-225	683	No protein	-	lncRNA	-	-
ENST00000848744.1	FAM88B-244	682	No protein	-	lncRNA	-	-
ENST00000848746.1	FAM88B-246	657	No protein	-	lncRNA	-	-
ENST00000848717.1	FAM88B-217	649	No protein	-	lncRNA	-	-
ENST00000848751.1	FAM88B-251	625	No protein	-	lncRNA	-	-
ENST00000848754.1	FAM88B-254	621	No protein	-	lncRNA	-	-
ENST00000848730.1	FAM88B-230	620	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000848752.1	FAM88B-252	616	No protein	-	lncRNA	-	-
ENST00000848753.1	FAM88B-253	611	No protein	-	lncRNA	-	-
ENST00000848737.1	FAM88B-237	594	No protein	-	lncRNA	-	-
ENST00000848729.1	FAM88B-229	552	No protein	-	lncRNA	-	-
ENST00000848719.1	FAM88B-219	541	No protein	-	lncRNA	-	-
ENST00000848715.1	FAM88B-215	536	No protein	-	lncRNA	-	-
ENST00000848747.1	FAM88B-247	525	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000848731.1	FAM88B-231	490	No protein	-	lncRNA	-	-
ENST00000848741.1	FAM88B-241	450	No protein	-	lncRNA	-	-
ENST00000848742.1	FAM88B-242	392	No protein	-	lncRNA	-	-
ENST00000848755.1	FAM88B-255	381	No protein	-	lncRNA	-	-
ENST00000848756.1	FAM88B-256	375	No protein	-	lncRNA	-	-
ENST00000848740.1	FAM88B-240	351	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 2,641 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENST00000305709.6

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000305709.6 FAM88B-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENST00000305709.6 FAM88B-201

Summary

About Us

Get help

Our sister sites

Follow us