Transcript: ENST00000667091.1 SNHG16-211

Description

small nucleolar RNA host gene 16 [Source:HGNC Symbol;Acc:HGNC:44352]

Gene Synonyms

ELNAT1, NBLA10727, NBLA12061, NCRAN

Location

Chromosome 17: 76,557,766-76,565,338 forward strand.

About this transcript

This transcript has 6 exons and maps to 426 oligo probes.

Gene

This transcript is a product of gene ENSG00000163597.18 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000587743.1	SNHG16-205	2665	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENST00000738069.1	SNHG16-219	827	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000448136.6	SNHG16-201	3616	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000668511.1	SNHG16-212	3081	No protein	-	lncRNA	-	-
ENST00000667091.1	SNHG16-211	3059	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000586846.2	SNHG16-203	3053	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000661348.4	SNHG16-210	3023	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000738117.1	SNHG16-267	2770	No protein	-	lncRNA	-	-
ENST00000587838.3	SNHG16-206	2647	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000670737.4	SNHG16-213	2586	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000653677.3	SNHG16-209	2544	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000493536.8	SNHG16-202	2470	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000738080.1	SNHG16-230	2435	No protein	-	lncRNA	-	-
ENST00000591956.2	SNHG16-208	2282	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000586942.8	SNHG16-204	2103	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000738082.1	SNHG16-232	2091	No protein	-	lncRNA	-	-
ENST00000590435.5	SNHG16-207	1947	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000738088.1	SNHG16-238	1893	No protein	-	lncRNA	-	-
ENST00000738085.1	SNHG16-235	1886	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000738086.1	SNHG16-236	1768	No protein	-	lncRNA	-	-
ENST00000738087.1	SNHG16-237	1750	No protein	-	lncRNA	-	-
ENST00000738110.1	SNHG16-260	1620	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000738113.1	SNHG16-263	1488	No protein	-	lncRNA	-	-
ENST00000738112.1	SNHG16-262	1410	No protein	-	lncRNA	-	-
ENST00000738099.1	SNHG16-249	1205	No protein	-	lncRNA	-	-
ENST00000738116.1	SNHG16-266	1110	No protein	-	lncRNA	-	-
ENST00000738089.1	SNHG16-239	1069	No protein	-	lncRNA	-	-
ENST00000738076.1	SNHG16-226	972	No protein	-	lncRNA	-	-
ENST00000738106.1	SNHG16-256	892	No protein	-	lncRNA	-	-
ENST00000738109.1	SNHG16-259	877	No protein	-	lncRNA	-	-
ENST00000738105.1	SNHG16-255	832	No protein	-	lncRNA	-	-
ENST00000738091.1	SNHG16-241	812	No protein	-	lncRNA	-	-
ENST00000738092.1	SNHG16-242	790	No protein	-	lncRNA	-	-
ENST00000738108.1	SNHG16-258	788	No protein	-	lncRNA	-	-
ENST00000738094.1	SNHG16-244	771	No protein	-	lncRNA	-	-
ENST00000738104.1	SNHG16-254	759	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000738100.1	SNHG16-250	758	No protein	-	lncRNA	-	-
ENST00000686755.3	SNHG16-214	738	No protein	-	lncRNA	-	-
ENST00000700957.2	SNHG16-216	734	No protein	-	lncRNA	-	-
ENST00000738090.1	SNHG16-240	720	No protein	-	lncRNA	-	-
ENST00000692197.3	SNHG16-215	714	No protein	-	lncRNA	-	-
ENST00000738072.1	SNHG16-222	706	No protein	-	lncRNA	-	-
ENST00000738107.1	SNHG16-257	691	No protein	-	lncRNA	-	-
ENST00000738111.1	SNHG16-261	688	No protein	-	lncRNA	-	-
ENST00000738075.1	SNHG16-225	680	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000738074.1	SNHG16-224	679	No protein	-	lncRNA	-	-
ENST00000738097.1	SNHG16-247	667	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000738103.1	SNHG16-253	666	No protein	-	lncRNA	-	-
ENST00000738096.1	SNHG16-246	663	No protein	-	lncRNA	-	-
ENST00000738098.1	SNHG16-248	661	No protein	-	lncRNA	-	-
ENST00000738101.1	SNHG16-251	659	No protein	-	lncRNA	-	-
ENST00000738093.1	SNHG16-243	657	No protein	-	lncRNA	-	-
ENST00000738095.1	SNHG16-245	655	No protein	-	lncRNA	-	-
ENST00000738118.1	SNHG16-268	653	No protein	-	lncRNA	-	-
ENST00000738115.1	SNHG16-265	637	No protein	-	lncRNA	-	-
ENST00000738119.1	SNHG16-269	628	No protein	-	lncRNA	-	-
ENST00000738073.1	SNHG16-223	595	No protein	-	lncRNA	-	-
ENST00000738077.1	SNHG16-227	593	No protein	-	lncRNA	-	-
ENST00000738102.1	SNHG16-252	557	No protein	-	lncRNA	-	-
ENST00000738083.1	SNHG16-233	553	No protein	-	lncRNA	-	-
ENST00000738084.1	SNHG16-234	551	No protein	-	lncRNA	-	-
ENST00000738079.1	SNHG16-229	527	No protein	-	lncRNA	-	-
ENST00000701062.2	SNHG16-217	513	No protein	-	lncRNA	-	-
ENST00000738071.1	SNHG16-221	511	No protein	-	lncRNA	-	-
ENST00000738078.1	SNHG16-228	488	No protein	-	lncRNA	-	-
ENST00000738070.1	SNHG16-220	488	No protein	-	lncRNA	-	-
ENST00000738081.1	SNHG16-231	486	No protein	-	lncRNA	-	-
ENST00000702193.2	SNHG16-218	483	No protein	-	lncRNA	-	-
ENST00000738114.1	SNHG16-264	381	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 3,059 bps,

Version

ENST00000667091.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000667091.1 SNHG16-211

Summary

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Transcript: ENST00000667091.1 SNHG16-211

Summary

About Us

Get help

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