Transcript: ENST00000456587.1 CLCA4-AS1-201

Description

CLCA4 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:54055]

Location

Chromosome 1: 86,571,181-86,693,203 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 51937 variant alleles and maps to 150 oligo probes.

Gene

This transcript is a product of gene ENSG00000236915.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000699483.1	CLCA4-AS1-204	3668	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000699484.1	CLCA4-AS1-205	3139	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000650379.1	CLCA4-AS1-203	2402	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000565575.1	CLCA4-AS1-202	961	No protein	-	lncRNA	-	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENST00000456587.1	CLCA4-AS1-201	522	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 522 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000456587.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000456587.1 CLCA4-AS1-201

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Transcript: ENST00000456587.1 CLCA4-AS1-201

Summary

About Us

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