Description

major histocompatibility complex, class II, DQ alpha 2 [Source:HGNC Symbol;Acc:HGNC:4943]

Synonyms

HLA-DXA

Gene

This transcript is a product of gene ENSG00000257473

This gene has 3 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
HLA-DQA2-001ENST000004431841725255 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-O19697 P01906 NM_020056
NP_064440
TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HLA-DQA2-205ENST000005527451422254 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-O19522 O19705 Q5Y7D2
Q67AA2 Q67AA3 Q67AA4
Q67AA8 Q67AB0 Q67AB1
Q67AB2 Q67AB3 Q67AC8
Q67AC9 Q67AD0 Q67AD1
Q67AD2 Q67AD3 Q67AD4
Q67AD7 Q67AD8 Q67AD9
Q67AE0 Q67AE1 Q67AE2
Q9UEF5
NM_002122
NP_002113
TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HLA-DQA2-204ENST000005481451079254 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-O19522 O19705 Q5Y7D2
Q67AA2 Q67AA3 Q67AA4
Q67AA8 Q67AB0 Q67AB1
Q67AB2 Q67AB3 Q67AC8
Q67AC9 Q67AD0 Q67AD1
Q67AD2 Q67AD3 Q67AD4
Q67AD7 Q67AD8 Q67AD9
Q67AE0 Q67AE1 Q67AE2
Q9UEF5
-TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Statistics

Exons: 5 Coding exons: 4 Transcript length: 1,725 bps Translation length: 255 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P01906

Transcript Support Level

NA

Ensembl version

ENST00000443184.2

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays