Description

major histocompatibility complex, class II, DQ beta 1 [Source:HGNC Symbol;Acc:4944]

Gene

This transcript is a product of gene ENSG00000231286

This gene has 9 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCDS incompleteCCDSGENCODE basic
HLA-DQB1-002ENST000003990651788ENSP00000382018269Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
HLA-DQB1-003ENST000004130891734ENSP00000396539261Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
HLA-DQB1-001ENST000003990881642ENSP00000382038261Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
HLA-DQB1-004ENST000004245301485ENSP00000411566224Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
HLA-DQB1-007ENST000004339361219ENSP00000414555134Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
HLA-DQB1-006ENST00000457445484ENSP00000416744144Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
HLA-DQB1-008ENST000004807491423ENSP00000435701136Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. ---
HLA-DQB1-009ENST00000476430428No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
HLA-DQB1-005ENST000004727084732No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
Statistics

Exons: 5 Coding exons: 5 Transcript length: 1,642 bps Translation length: 261 residues

Ensembl version

ENST00000399088.4

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000312478 (version 2)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays