Description

vacuolar protein sorting 52 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:HGNC:10518]

Synonyms

ARE1, SACM2L

About this transcript

This transcript has 20 exons, is annotated with 5 domains and features and is associated with 57 variations.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
VPS52-001ENST000004410582960723aaENSP00000390831
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q8N1B4 NM_001289174
NM_001289175
NP_001276103
NP_001276104
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
VPS52-002ENST000004717612602No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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VPS52-004ENST000004904331060No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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VPS52-005ENST00000491657925No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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VPS52-011ENST00000471922878No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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VPS52-010ENST00000479062743No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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VPS52-006ENST00000467430505No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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VPS52-007ENST000004896363338No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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VPS52-003ENST00000475750786No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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VPS52-009ENST00000475583547No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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VPS52-008ENST00000471802453No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Statistics

Exons: 20 Coding exons: 20 Transcript length: 2,960 bps Translation length: 723 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8N1B4

Ensembl version

ENST00000441058.2

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays