Description

vacuolar protein sorting 52 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:HGNC:10518]

Synonyms

ARE1, SACM2L

About this transcript

This transcript has 20 exons, is annotated with 5 domains and features and is associated with 95 variations.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
VPS52-001ENST000004438602960723aaENSP00000404016
 
Protein coding
-Q8N1B4 NM_001289174
NM_001289175
NM_022553
NP_001276103
NP_001276104
NP_072047
TSL:1GENCODE basic
VPS52-007ENST00000478392333888aaENSP00000434469
 
Nonsense mediated decay
---TSL:2
VPS52-002ENST000004833512602No protein-
 
Processed transcript
---TSL:2
VPS52-004ENST000004876111060No protein-
 
Processed transcript
---TSL:5
VPS52-005ENST00000462911925No protein-
 
Processed transcript
---TSL:5
VPS52-011ENST00000494451878No protein-
 
Processed transcript
---TSL:2
VPS52-010ENST00000467000743No protein-
 
Processed transcript
---TSL:1
VPS52-006ENST00000485137505No protein-
 
Processed transcript
---TSL:2
VPS52-003ENST00000463636786No protein-
 
Retained intron
---TSL:5
VPS52-009ENST00000488248547No protein-
 
Retained intron
---TSL:3
VPS52-008ENST00000484059453No protein-
 
Retained intron
---TSL:5
Statistics

Exons: 20 Coding exons: 20 Transcript length: 2,960 bps Translation length: 723 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8N1B4

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENST00000443860.2

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays