Description

major histocompatibility complex, class I, B [Source:HGNC Symbol;Acc:HGNC:4932]

Synonyms

AS

Gene

This transcript is a product of gene ENSG00000206450

This gene has 8 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
HLA-B-001ENST000003596351561362 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B9VWB1 C7FDS0 C9WD04
D1G0T5 D3U467 D3XDG1
D5FWB7 D5FZK3 E9LY27
E9LY28 E9LY47 F2X5V1
F4YU34 F4YZU8 F4YZV1
F8R161 F8R8J1 F8T957
G0ZDT8 G1EMN0 G1EPK5
G1EPQ9 G9HW40 H9BQ98
I6M554 I6MHH7 I6MHI1
I6MHI4 I6NN10 I6NS75
I6NXF7 I6QQT3 I7APH9
K4JES8 K7P5G2 K9L8C4
L0BVL7 L7PG40 M1F364
M1FUU1 M9WLY3 O78177
P18463 P18464 P30466
P30491 P30492 P30493
P30495 P30498 P30685
Q04826 Q08GD2 Q09JY6
Q29718 Q29843 Q29940
Q30210 Q4ZHW0 Q58P05
Q5F311 Q5QR28 Q5QR32
Q5QR35 Q5QR37 Q5QR39
Q5QR40 Q5QR41 Q5QR44
Q5QR47 Q5QR52 Q5QR53
Q5QR54 Q5QR55 Q5QR56
Q5QR70 Q5QR71 Q5QR74
Q5QR78 Q66WL2 Q6ZXT6
Q709M5 Q70HJ6 Q70HJ8
Q7YNX2 Q7YP17 Q861D4
Q861D6 Q861D8 Q861D9
Q861E0 Q861E1 Q861E2
Q861E3 Q861E4 Q8HWQ3
Q8HWR2 Q8HWR3 Q8HWR4
Q8HWR8 Q8HWS8 Q8MGY8
Q8MHM9 Q8WLT1 Q9GIL8
Q9GIZ8 S6AU73 U6EUE7
V5LKS1 V5NVK0 V5NXQ9
NM_005514
NP_005505
TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HLA-B-006ENST000004181471154241 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B9VWB1 Q29843 Q5F311
Q5QR28 Q5QR32 Q5QR35
Q5QR37 Q5QR39 Q5QR40
Q5QR41 Q5QR44 Q5QR47
Q5QR52 Q5QR53 Q5QR54
Q5QR55 Q5QR56 Q6ZXT6
Q709M5 Q70HJ6 Q7YNX2
Q7YP17 Q861D4 Q861D6
Q861D8 Q861D9 Q861E0
Q861E1 Q861E2 Q861E3
Q861E4 Q8HWQ3 Q8MGY8
-CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

HLA-B-004ENST000004792031005224 aa
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-C7FDS0 C9WD04 D1G0T5
D3U467 D3XDG1 D5FWB7
D5FZK3 E9LY27 E9LY28
E9LY47 F2X5V1 F4YU34
F4YZU8 F4YZV1 F8R161
F8R8J1 F8T957 G0ZDT8
G1EMN0 G1EPK5 G1EPQ9
G9HW40 H9BQ98 I6M554
I6MHH7 I6MHI1 I6MHI4
I6NN10 I6NS75 I6NXF7
I6QQT3 I7APH9 K4JES8
K7P5G2 K9L8C4 L0BVL7
L7PG40 M1F364 M1FUU1
M9WLY3 O78177 Q08GD2
Q4ZHW0 Q58P05 Q5QR70
Q5QR71 Q5QR74 Q5QR78
Q66WL2 Q70HJ8 Q8HWR2
Q8HWR3 Q8HWR4 Q8HWR8
Q8HWS8 Q8MHM9 Q8WLT1
Q9GIL8 Q9GIZ8 V5LKS1
V5NVK0 V5NXQ9
-TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

HLA-B-002ENST000004935121088No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

HLA-B-007ENST00000479990917No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

HLA-B-003ENST00000466304863No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

HLA-B-008ENST00000490054753No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

HLA-B-005ENST00000475493585No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 6 Coding exons: 4 Transcript length: 1,005 bps Translation length: 224 residues

Transcript Support Level

NA

Ensembl version

ENST00000479203.1

Type

Known nonsense mediated decay

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:

Transcript-based displays