Description

tubulin, beta class I [Source:HGNC Symbol;Acc:HGNC:20778]

Synonyms

M40, MGC16435, OK/SW-cl.56, Tubb5

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
TUBB-003ENST000004005342904426 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A4UCU2 Q5JP53 Q5ST81
Q6P602 Q96B85 Q9BUU9
NP_001280143
NP_001280145
TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TUBB-004ENST000004005302824372 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A4UCU2 Q5ST81 Q6P602
Q96B85 Q9BUU9
NP_001280145
TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TUBB-001ENST000003835642671444 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A4UCU2 P07437 Q5ST81
Q5SU16 Q6P602 Q96B85
Q9BUU9
NP_001280141
NP_001280143
NP_001280145
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TUBB-002ENST000004005312633372 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A4UCU2 Q5ST81 Q6P602
Q96B85 Q9BUU9
NP_001280145
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Statistics

Exons: 4 Coding exons: 4 Transcript length: 2,671 bps Translation length: 444 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P07437

Transcript Support Level

1

Ensembl version

ENST00000383564.6

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays