Description

fibrinogen alpha chain [Source:HGNC Symbol;Acc:HGNC:3661]

About this transcript

This transcript has 6 exons, is annotated with 15 domains and features, is associated with 539 variations and maps to 22 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
FGA-002ENST000003020533678866aaENSP00000306361
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS3787P02671 NM_000508
NP_000499
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
FGA-001ENST000004031062248644aaENSP00000385981
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS47152P02671 NM_021871
NP_068657
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
FGA-201ENST000006225321130289aaENSP00000478487
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A087WUA0 -TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Statistics

Exons: 6 Coding exons: 6 Transcript length: 3,678 bps Translation length: 866 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS3787

Uniprot

This transcript corresponds to the following Uniprot identifiers: P02671

Transcript Support Level (TSL)

TSL:2

Ensembl version

ENST00000302053.6

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays