Transcript: ENST00000518377.3 HRURF-201

Description

HR upstream open reading frame [Source:HGNC Symbol;Acc:HGNC:55085]

Gene Synonyms

U2HR

Location

Chromosome 8: 22,130,458-22,131,010 reverse strand.

About this transcript

This transcript has 1 exon, is associated with 357 variant alleles and maps to 95 oligo probes.

Gene

This transcript is a product of gene ENSG00000288677.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000518377.3	HRURF-201	553	34aa	ENSP00000505144.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS94263	A0A7P0T8H1 P0DUH7	NM_001394132.1	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 553 bps, Translation length: 34 residues

MANE

This MANE Select transcript contains ENSP00000505144 and matches to NM_001394132.1 and NP_001381061.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: P0DUH7

CCDS

This transcript is a member of the Human CCDS set: CCDS94263

Transcript Support Level (TSL)

TSL:4

Version

ENST00000518377.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000518377.3 HRURF-201

Summary

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Transcript: ENST00000518377.3 HRURF-201

Summary

About Us

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