Transcript: ENST00000443292.2

Description

novel protein

Location

Chromosome 10: 86,654,617-86,700,020 forward strand.

About this transcript

This transcript has 18 exons, is annotated with 48 domains and features, is associated with 21600 variant alleles and maps to 672 oligo probes.

Gene

This transcript is a product of gene ENSG00000289258.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000443292.2	-	3315	833aa	ENSP00000393132.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C9JWU6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000685347.1	-	3110	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-
ENST00000692941.1	-	3731	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 3,315 bps, Translation length: 833 residues

Transcript Support Level (TSL)

TSL:1

Version

ENST00000443292.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000443292.2

Summary

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Transcript: ENST00000443292.2

Summary

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