Description

paired-like homeodomain 3 [Source:HGNC Symbol;Acc:HGNC:9006]

Synonyms

ASMD

About this transcript

This transcript has 4 exons, is annotated with 11 domains and features, is associated with 56 variations and maps to 20 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
PITX3-001ENST000003700021391302aaENSP00000359019
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7532O75364 NM_005029
NP_005020
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

PITX3-201ENST000005398041187302aaENSP00000439383
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7532O75364 -TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Statistics

Exons: 4 Coding exons: 3 Transcript length: 1,187 bps Translation length: 302 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS7532

Uniprot

This transcript corresponds to the following Uniprot identifiers: O75364

Transcript Support Level (TSL)

TSL:5

Ensembl version

ENST00000539804.1

Type

Known protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays