Transcript: ENST00000622062.1

Description

novel transcript

Location

Chromosome 15: 22,665,128-22,675,118 forward strand.

About this transcript

This transcript has 4 exons and maps to 680 oligo probes.

Gene

This transcript is a product of gene ENSG00000290399.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000622062.1	-	2944	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000612263.1	-	538	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000752636.1	-	2233	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000621139.4	-	4494	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000752643.1	-	2394	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000752660.1	-	2358	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000752640.1	-	2243	No protein	-	lncRNA	-	-
ENST00000752620.1	-	2191	No protein	-	lncRNA	-	-
ENST00000752664.1	-	2191	No protein	-	lncRNA	-	-
ENST00000752623.1	-	2173	No protein	-	lncRNA	-	-
ENST00000752624.1	-	2164	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000752644.1	-	2143	No protein	-	lncRNA	-	-
ENST00000752656.1	-	2135	No protein	-	lncRNA	-	-
ENST00000752645.1	-	2060	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000752641.1	-	1996	No protein	-	lncRNA	-	-
ENST00000752622.1	-	1941	No protein	-	lncRNA	-	-
ENST00000752653.1	-	1939	No protein	-	lncRNA	-	-
ENST00000752637.1	-	1927	No protein	-	lncRNA	-	-
ENST00000752648.1	-	1920	No protein	-	lncRNA	-	-
ENST00000752661.1	-	1890	No protein	-	lncRNA	-	-
ENST00000752625.1	-	1873	No protein	-	lncRNA	-	-
ENST00000752655.1	-	1868	No protein	-	lncRNA	-	-
ENST00000752652.1	-	1843	No protein	-	lncRNA	-	-
ENST00000752629.1	-	1820	No protein	-	lncRNA	-	-
ENST00000752631.1	-	1814	No protein	-	lncRNA	-	-
ENST00000752662.1	-	1768	No protein	-	lncRNA	-	-
ENST00000752621.1	-	1763	No protein	-	lncRNA	-	-
ENST00000752619.1	-	1745	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000752673.1	-	1737	No protein	-	lncRNA	-	-
ENST00000752650.1	-	1735	No protein	-	lncRNA	-	-
ENST00000752651.1	-	1732	No protein	-	lncRNA	-	-
ENST00000752675.1	-	1725	No protein	-	lncRNA	-	-
ENST00000752639.1	-	1705	No protein	-	lncRNA	-	-
ENST00000752659.1	-	1622	No protein	-	lncRNA	-	-
ENST00000752669.1	-	1587	No protein	-	lncRNA	-	-
ENST00000752638.1	-	1586	No protein	-	lncRNA	-	-
ENST00000752658.1	-	1540	No protein	-	lncRNA	-	-
ENST00000752618.1	-	1525	No protein	-	lncRNA	-	-
ENST00000752628.1	-	1511	No protein	-	lncRNA	-	-
ENST00000752627.1	-	1503	No protein	-	lncRNA	-	-
ENST00000752632.1	-	1443	No protein	-	lncRNA	-	-
ENST00000752642.1	-	1423	No protein	-	lncRNA	-	-
ENST00000752654.1	-	1422	No protein	-	lncRNA	-	-
ENST00000752635.1	-	1324	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000752630.1	-	1313	No protein	-	lncRNA	-	-
ENST00000752657.1	-	1295	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000752634.1	-	1282	No protein	-	lncRNA	-	-
ENST00000752649.1	-	1258	No protein	-	lncRNA	-	-
ENST00000752666.1	-	1254	No protein	-	lncRNA	-	-
ENST00000752668.1	-	1236	No protein	-	lncRNA	-	-
ENST00000752626.1	-	1232	No protein	-	lncRNA	-	-
ENST00000752665.1	-	1157	No protein	-	lncRNA	-	-
ENST00000752633.1	-	1126	No protein	-	lncRNA	-	-
ENST00000752667.1	-	1088	No protein	-	lncRNA	-	-
ENST00000752670.1	-	1047	No protein	-	lncRNA	-	-
ENST00000752663.1	-	1011	No protein	-	lncRNA	-	-
ENST00000752671.1	-	996	No protein	-	lncRNA	-	-
ENST00000752646.1	-	971	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000752647.1	-	968	No protein	-	lncRNA	-	-
ENST00000752676.1	-	935	No protein	-	lncRNA	-	-
ENST00000752681.1	-	755	No protein	-	lncRNA	-	-
ENST00000752672.1	-	628	No protein	-	lncRNA	-	-
ENST00000752678.1	-	481	No protein	-	lncRNA	-	-
ENST00000752679.1	-	377	No protein	-	lncRNA	-	-
ENST00000752677.1	-	371	No protein	-	lncRNA	-	-
ENST00000752680.1	-	314	No protein	-	lncRNA	-	-
ENST00000752674.1	-	309	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 2,944 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENST00000622062.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

overlaps pseudogene [Definitions]

Transcript: ENST00000622062.1

Summary

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Transcript: ENST00000622062.1

Summary

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