Transcript: ENST00000617436.3 LINC03062-202

Description

long intergenic non-protein coding RNA 3062 [Source:HGNC Symbol;Acc:HGNC:56369]

Location

Chromosome 9: 89,639,749-89,719,759 forward strand.

About this transcript

This transcript has 6 exons and maps to 291 oligo probes.

Gene

This transcript is a product of gene ENSG00000237372.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000718835.1	LINC03062-205	1063	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000617436.3	LINC03062-202	2228	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000718861.1	LINC03062-231	1887	No protein	-	lncRNA	-	-
ENST00000650746.1	LINC03062-203	1570	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000718845.1	LINC03062-215	1467	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000718844.1	LINC03062-214	1377	No protein	-	lncRNA	-	-
ENST00000718847.1	LINC03062-217	1184	No protein	-	lncRNA	-	-
ENST00000718838.1	LINC03062-208	1158	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000718846.1	LINC03062-216	1107	No protein	-	lncRNA	-	-
ENST00000718839.1	LINC03062-209	1045	No protein	-	lncRNA	-	-
ENST00000718837.1	LINC03062-207	1037	No protein	-	lncRNA	-	-
ENST00000444374.3	LINC03062-201	973	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000718850.1	LINC03062-220	904	No protein	-	lncRNA	-	-
ENST00000718855.1	LINC03062-225	857	No protein	-	lncRNA	-	-
ENST00000718856.1	LINC03062-226	851	No protein	-	lncRNA	-	-
ENST00000718859.1	LINC03062-229	843	No protein	-	lncRNA	-	-
ENST00000672445.1	LINC03062-204	835	No protein	-	lncRNA	-	-
ENST00000718842.1	LINC03062-212	799	No protein	-	lncRNA	-	-
ENST00000718841.1	LINC03062-211	797	No protein	-	lncRNA	-	-
ENST00000718851.1	LINC03062-221	749	No protein	-	lncRNA	-	-
ENST00000718853.1	LINC03062-223	729	No protein	-	lncRNA	-	-
ENST00000718857.1	LINC03062-227	688	No protein	-	lncRNA	-	-
ENST00000718863.1	LINC03062-233	661	No protein	-	lncRNA	-	-
ENST00000718860.1	LINC03062-230	654	No protein	-	lncRNA	-	-
ENST00000718862.1	LINC03062-232	650	No protein	-	lncRNA	-	-
ENST00000718864.1	LINC03062-234	647	No protein	-	lncRNA	-	-
ENST00000718848.1	LINC03062-218	627	No protein	-	lncRNA	-	-
ENST00000718836.1	LINC03062-206	623	No protein	-	lncRNA	-	-
ENST00000718854.1	LINC03062-224	614	No protein	-	lncRNA	-	-
ENST00000718858.1	LINC03062-228	571	No protein	-	lncRNA	-	-
ENST00000718840.1	LINC03062-210	558	No protein	-	lncRNA	-	-
ENST00000718852.1	LINC03062-222	480	No protein	-	lncRNA	-	-
ENST00000718849.1	LINC03062-219	475	No protein	-	lncRNA	-	-
ENST00000718843.1	LINC03062-213	427	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 2,228 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000617436.3

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000617436.3 LINC03062-202

Summary

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Transcript: ENST00000617436.3 LINC03062-202

Summary

About Us

Get help

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