Transcript: ENST00000581956.2 KRT18P55-203

Description

keratin 18 pseudogene 55 [Source:HGNC Symbol;Acc:HGNC:26874]

Location

Chromosome 17: 28,275,850-28,307,382 reverse strand.

About this transcript

This transcript has 3 exons and maps to 300 oligo probes.

Gene

This transcript is a product of gene ENSG00000293325.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000764155.1	KRT18P55-204	1561	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000577198.6	KRT18P55-202	2145	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000581956.2	KRT18P55-203	2030	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000764158.1	KRT18P55-207	1975	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000764167.1	KRT18P55-216	1873	No protein	-	lncRNA	-	-
ENST00000764161.1	KRT18P55-210	1839	No protein	-	lncRNA	-	-
ENST00000764163.1	KRT18P55-212	1785	No protein	-	lncRNA	-	-
ENST00000764157.1	KRT18P55-206	1770	No protein	-	lncRNA	-	-
ENST00000764156.1	KRT18P55-205	1729	No protein	-	lncRNA	-	-
ENST00000764160.1	KRT18P55-209	1724	No protein	-	lncRNA	-	-
ENST00000764162.1	KRT18P55-211	1719	No protein	-	lncRNA	-	-
ENST00000764166.1	KRT18P55-215	1706	No protein	-	lncRNA	-	-
ENST00000764164.1	KRT18P55-213	1650	No protein	-	lncRNA	-	-
ENST00000764159.1	KRT18P55-208	1610	No protein	-	lncRNA	-	-
ENST00000764165.1	KRT18P55-214	1597	No protein	-	lncRNA	-	-
ENST00000764169.1	KRT18P55-218	693	No protein	-	lncRNA	-	-
ENST00000764168.1	KRT18P55-217	575	No protein	-	lncRNA	-	-
ENST00000764170.1	KRT18P55-219	549	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 2,030 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000581956.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Annotation Attributes

overlaps pseudogene [Definitions]

Transcript: ENST00000581956.2 KRT18P55-203

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Transcript: ENST00000581956.2 KRT18P55-203

Summary

About Us

Get help

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