Transcript: ENST00000568184.1

Description

novel transcript

Location

Chromosome 15: 77,941,899-77,944,582 reverse strand.

About this transcript

This transcript has 3 exons and maps to 275 oligo probes.

Gene

This transcript is a product of gene ENSG00000290665.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000567226.2	-	2266	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000724215.1	-	1179	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000724233.1	-	1170	No protein	-	lncRNA	-	-
ENST00000724225.1	-	1031	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000724223.1	-	911	No protein	-	lncRNA	-	-
ENST00000724220.1	-	870	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000724229.1	-	849	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000724227.1	-	839	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000724226.1	-	818	No protein	-	lncRNA	-	-
ENST00000724224.1	-	802	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000724230.1	-	792	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000724231.1	-	791	No protein	-	lncRNA	-	-
ENST00000724217.1	-	783	No protein	-	lncRNA	-	-
ENST00000724228.1	-	746	No protein	-	lncRNA	-	-
ENST00000724219.1	-	706	No protein	-	lncRNA	-	-
ENST00000724214.1	-	657	No protein	-	lncRNA	-	-
ENST00000724222.1	-	611	No protein	-	lncRNA	-	-
ENST00000724216.1	-	606	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000568184.1	-	602	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000724218.1	-	597	No protein	-	lncRNA	-	-
ENST00000724213.1	-	587	No protein	-	lncRNA	-	-
ENST00000724212.1	-	579	No protein	-	lncRNA	-	-
ENST00000724210.1	-	539	No protein	-	lncRNA	-	-
ENST00000724209.1	-	537	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000724221.1	-	523	No protein	-	lncRNA	-	-
ENST00000724211.1	-	418	No protein	-	lncRNA	-	-
ENST00000724232.1	-	304	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 602 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000568184.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

overlaps pseudogene [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000568184.1

Summary

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Transcript: ENST00000568184.1

Summary

About Us

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