Transcript: ENST00000565155.3 GNAO1-DT-202

Description

GNAO1 divergent transcript [Source:HGNC Symbol;Acc:HGNC:27543]

Gene Synonyms

GNAO1-AS1

Location

Chromosome 16: 56,143,314-56,189,601 reverse strand.

About this transcript

This transcript has 4 exons and maps to 245 oligo probes.

Gene

This transcript is a product of gene ENSG00000246379.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000663751.1	GNAO1-DT-212	864	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000715694.1	GNAO1-DT-216	4458	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000501259.5	GNAO1-DT-201	2678	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000662188.1	GNAO1-DT-210	2499	No protein	-	lncRNA	-	-
ENST00000665141.2	GNAO1-DT-214	2254	No protein	-	lncRNA	-	-
ENST00000825398.1	GNAO1-DT-227	2240	No protein	-	lncRNA	-	-
ENST00000825397.1	GNAO1-DT-226	2026	No protein	-	lncRNA	-	-
ENST00000825394.1	GNAO1-DT-223	1844	No protein	-	lncRNA	-	-
ENST00000657483.1	GNAO1-DT-208	1683	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000825407.1	GNAO1-DT-236	1678	No protein	-	lncRNA	-	-
ENST00000825395.1	GNAO1-DT-224	1621	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000825390.1	GNAO1-DT-219	1556	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000664309.2	GNAO1-DT-213	1540	No protein	-	lncRNA	-	-
ENST00000825405.1	GNAO1-DT-234	1497	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000825392.1	GNAO1-DT-221	1169	No protein	-	lncRNA	-	-
ENST00000565155.3	GNAO1-DT-202	977	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000825402.1	GNAO1-DT-231	949	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000825401.1	GNAO1-DT-230	937	No protein	-	lncRNA	-	-
ENST00000825388.1	GNAO1-DT-217	924	No protein	-	lncRNA	-	-
ENST00000569025.1	GNAO1-DT-205	888	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000668774.1	GNAO1-DT-215	852	No protein	-	lncRNA	-	-
ENST00000825396.1	GNAO1-DT-225	835	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000825391.1	GNAO1-DT-220	801	No protein	-	lncRNA	-	-
ENST00000565441.1	GNAO1-DT-203	795	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000825414.1	GNAO1-DT-243	774	No protein	-	lncRNA	-	-
ENST00000662870.1	GNAO1-DT-211	762	No protein	-	lncRNA	-	-
ENST00000825393.1	GNAO1-DT-222	753	No protein	-	lncRNA	-	-
ENST00000661960.2	GNAO1-DT-209	718	No protein	-	lncRNA	-	-
ENST00000825411.1	GNAO1-DT-240	714	No protein	-	lncRNA	-	-
ENST00000825404.1	GNAO1-DT-233	675	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000825389.1	GNAO1-DT-218	674	No protein	-	lncRNA	-	-
ENST00000567929.1	GNAO1-DT-204	665	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000648729.1	GNAO1-DT-206	654	No protein	-	lncRNA	-	-
ENST00000825400.1	GNAO1-DT-229	633	No protein	-	lncRNA	-	-
ENST00000654562.2	GNAO1-DT-207	626	No protein	-	lncRNA	-	-
ENST00000825408.1	GNAO1-DT-237	600	No protein	-	lncRNA	-	-
ENST00000825417.1	GNAO1-DT-246	576	No protein	-	lncRNA	-	-
ENST00000825403.1	GNAO1-DT-232	543	No protein	-	lncRNA	-	-
ENST00000825416.1	GNAO1-DT-245	539	No protein	-	lncRNA	-	-
ENST00000825418.1	GNAO1-DT-247	513	No protein	-	lncRNA	-	-
ENST00000825399.1	GNAO1-DT-228	504	No protein	-	lncRNA	-	-
ENST00000825406.1	GNAO1-DT-235	486	No protein	-	lncRNA	-	-
ENST00000825413.1	GNAO1-DT-242	483	No protein	-	lncRNA	-	-
ENST00000825412.1	GNAO1-DT-241	479	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000825409.1	GNAO1-DT-238	429	No protein	-	lncRNA	-	-
ENST00000825410.1	GNAO1-DT-239	429	No protein	-	lncRNA	-	-
ENST00000825415.1	GNAO1-DT-244	376	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 977 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000565155.3

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000565155.3 GNAO1-DT-202

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Transcript: ENST00000565155.3 GNAO1-DT-202

Summary

About Us

Get help

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