Transcript: ENST00000558835.1 LINC01586-202

Description

long intergenic non-protein coding RNA 1586 [Source:HGNC Symbol;Acc:HGNC:51434]

Gene Synonyms

TCONS_00023252

Location

Chromosome 15: 88,603,383-88,604,059 reverse strand.

About this transcript

This transcript has 2 exons and maps to 91 oligo probes.

Gene

This transcript is a product of gene ENSG00000249487.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000812004.1	LINC01586-206	644	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000506090.6	LINC01586-201	1966	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000660890.2	LINC01586-205	1728	No protein	-	lncRNA	-	-
ENST00000812008.1	LINC01586-210	1723	No protein	-	lncRNA	-	-
ENST00000812006.1	LINC01586-208	1668	No protein	-	lncRNA	-	-
ENST00000660022.1	LINC01586-204	1596	No protein	-	lncRNA	-	-
ENST00000812005.1	LINC01586-207	1476	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000812011.1	LINC01586-213	1378	No protein	-	lncRNA	-	-
ENST00000812016.1	LINC01586-218	1219	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000812010.1	LINC01586-212	1054	No protein	-	lncRNA	-	-
ENST00000812018.1	LINC01586-220	853	No protein	-	lncRNA	-	-
ENST00000812009.1	LINC01586-211	801	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000812020.1	LINC01586-222	769	No protein	-	lncRNA	-	-
ENST00000812012.1	LINC01586-214	715	No protein	-	lncRNA	-	-
ENST00000812017.1	LINC01586-219	713	No protein	-	lncRNA	-	-
ENST00000812013.1	LINC01586-215	710	No protein	-	lncRNA	-	-
ENST00000812021.1	LINC01586-223	682	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000560368.1	LINC01586-203	622	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000812015.1	LINC01586-217	540	No protein	-	lncRNA	-	-
ENST00000812019.1	LINC01586-221	456	No protein	-	lncRNA	-	-
ENST00000812022.1	LINC01586-224	430	No protein	-	lncRNA	-	-
ENST00000812007.1	LINC01586-209	413	No protein	-	lncRNA	-	-
ENST00000812023.1	LINC01586-225	408	No protein	-	lncRNA	-	-
ENST00000812014.1	LINC01586-216	379	No protein	-	lncRNA	-	-
ENST00000558835.1	LINC01586-202	189	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 189 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000558835.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000558835.1 LINC01586-202

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Transcript: ENST00000558835.1 LINC01586-202

Summary

About Us

Get help

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