Transcript: ENST00000519393.7 LINC03021-203

Description

long intergenic non-protein coding RNA 3021 [Source:HGNC Symbol;Acc:HGNC:56149]

Location

Chromosome 8: 2,665,815-2,728,452 reverse strand.

About this transcript

This transcript has 5 exons and maps to 118 oligo probes.

Gene

This transcript is a product of gene ENSG00000254319.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000725400.1	LINC03021-217	495	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000664965.1	LINC03021-213	3386	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000654513.2	LINC03021-207	1890	No protein	-	lncRNA	-	-
ENST00000520570.2	LINC03021-204	1677	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000665048.2	LINC03021-214	1617	No protein	-	lncRNA	-	-
ENST00000658181.2	LINC03021-211	1539	No protein	-	lncRNA	-	-
ENST00000654884.2	LINC03021-208	1455	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000655522.1	LINC03021-210	1430	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000725404.1	LINC03021-221	1424	No protein	-	lncRNA	-	-
ENST00000725447.1	LINC03021-264	1360	No protein	-	lncRNA	-	-
ENST00000725403.1	LINC03021-220	1316	No protein	-	lncRNA	-	-
ENST00000725415.1	LINC03021-232	1268	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000725436.1	LINC03021-253	1267	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000725402.1	LINC03021-219	1173	No protein	-	lncRNA	-	-
ENST00000725416.1	LINC03021-233	1136	No protein	-	lncRNA	-	-
ENST00000725417.1	LINC03021-234	1059	No protein	-	lncRNA	-	-
ENST00000655416.2	LINC03021-209	1025	No protein	-	lncRNA	-	-
ENST00000725418.1	LINC03021-235	1016	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000725419.1	LINC03021-236	1014	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000725424.1	LINC03021-241	978	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000725437.1	LINC03021-254	974	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000725433.1	LINC03021-250	951	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000725405.1	LINC03021-222	925	No protein	-	lncRNA	-	-
ENST00000517984.6	LINC03021-202	916	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000519393.7	LINC03021-203	914	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000725455.1	LINC03021-272	904	No protein	-	lncRNA	-	-
ENST00000725420.1	LINC03021-237	903	No protein	-	lncRNA	-	-
ENST00000725435.1	LINC03021-252	899	No protein	-	lncRNA	-	-
ENST00000517357.6	LINC03021-201	871	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000725446.1	LINC03021-263	870	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000725423.1	LINC03021-240	859	No protein	-	lncRNA	-	-
ENST00000523971.6	LINC03021-206	849	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000671533.1	LINC03021-216	844	No protein	-	lncRNA	-	-
ENST00000725429.1	LINC03021-246	839	No protein	-	lncRNA	-	-
ENST00000666066.1	LINC03021-215	832	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000725414.1	LINC03021-231	805	No protein	-	lncRNA	-	-
ENST00000659324.1	LINC03021-212	788	No protein	-	lncRNA	-	-
ENST00000725432.1	LINC03021-249	787	No protein	-	lncRNA	-	-
ENST00000725407.1	LINC03021-224	786	No protein	-	lncRNA	-	-
ENST00000725434.1	LINC03021-251	766	No protein	-	lncRNA	-	-
ENST00000725452.1	LINC03021-269	737	No protein	-	lncRNA	-	-
ENST00000725453.1	LINC03021-270	720	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000725438.1	LINC03021-255	713	No protein	-	lncRNA	-	-
ENST00000725451.1	LINC03021-268	707	No protein	-	lncRNA	-	-
ENST00000725421.1	LINC03021-238	705	No protein	-	lncRNA	-	-
ENST00000725426.1	LINC03021-243	680	No protein	-	lncRNA	-	-
ENST00000725425.1	LINC03021-242	678	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000725408.1	LINC03021-225	672	No protein	-	lncRNA	-	-
ENST00000725450.1	LINC03021-267	670	No protein	-	lncRNA	-	-
ENST00000520842.7	LINC03021-205	660	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000725456.1	LINC03021-273	647	No protein	-	lncRNA	-	-
ENST00000725428.1	LINC03021-245	637	No protein	-	lncRNA	-	-
ENST00000725441.1	LINC03021-258	619	No protein	-	lncRNA	-	-
ENST00000725413.1	LINC03021-230	612	No protein	-	lncRNA	-	-
ENST00000725449.1	LINC03021-266	609	No protein	-	lncRNA	-	-
ENST00000725454.1	LINC03021-271	602	No protein	-	lncRNA	-	-
ENST00000725430.1	LINC03021-247	601	No protein	-	lncRNA	-	-
ENST00000725442.1	LINC03021-259	599	No protein	-	lncRNA	-	-
ENST00000725410.1	LINC03021-227	589	No protein	-	lncRNA	-	-
ENST00000725401.1	LINC03021-218	579	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000725422.1	LINC03021-239	528	No protein	-	lncRNA	-	-
ENST00000725440.1	LINC03021-257	527	No protein	-	lncRNA	-	-
ENST00000725448.1	LINC03021-265	519	No protein	-	lncRNA	-	-
ENST00000725443.1	LINC03021-260	517	No protein	-	lncRNA	-	-
ENST00000725411.1	LINC03021-228	507	No protein	-	lncRNA	-	-
ENST00000725431.1	LINC03021-248	493	No protein	-	lncRNA	-	-
ENST00000725427.1	LINC03021-244	447	No protein	-	lncRNA	-	-
ENST00000725409.1	LINC03021-226	434	No protein	-	lncRNA	-	-
ENST00000725439.1	LINC03021-256	433	No protein	-	lncRNA	-	-
ENST00000725412.1	LINC03021-229	387	No protein	-	lncRNA	-	-
ENST00000725406.1	LINC03021-223	384	No protein	-	lncRNA	-	-
ENST00000725445.1	LINC03021-262	381	No protein	-	lncRNA	-	-
ENST00000725444.1	LINC03021-261	331	No protein	-	lncRNA	-	-
ENST00000725457.1	LINC03021-274	312	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 914 bps,

Transcript Support Level (TSL)

TSL:4

Version

ENST00000519393.7

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000519393.7 LINC03021-203

Summary

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Transcript: ENST00000519393.7 LINC03021-203

Summary

About Us

Get help

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