Transcript: ENST00000513071.2 CYP2U1-AS1-203

Description

CYP2U1 and SGMS2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:54817]

Location

Chromosome 4: 107,907,226-107,978,982 reverse strand.

About this transcript

This transcript has 2 exons and maps to 66 oligo probes.

Gene

This transcript is a product of gene ENSG00000245293.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000656249.1	CYP2U1-AS1-204	2477	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000513071.2	CYP2U1-AS1-203	3587	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000656358.1	CYP2U1-AS1-205	3446	No protein	-	lncRNA	-	-
ENST00000512428.1	CYP2U1-AS1-202	3147	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000658105.4	CYP2U1-AS1-206	2974	No protein	-	lncRNA	-	-
ENST00000499098.1	CYP2U1-AS1-201	2810	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000686573.3	CYP2U1-AS1-209	1640	No protein	-	lncRNA	-	-
ENST00000668384.1	CYP2U1-AS1-208	1626	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000668082.1	CYP2U1-AS1-207	1475	No protein	-	lncRNA	-	-
ENST00000781792.1	CYP2U1-AS1-215	705	No protein	-	lncRNA	-	-
ENST00000702404.2	CYP2U1-AS1-211	561	No protein	-	lncRNA	-	-
ENST00000781791.1	CYP2U1-AS1-214	544	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000687236.2	CYP2U1-AS1-210	480	No protein	-	lncRNA	-	-
ENST00000781794.1	CYP2U1-AS1-217	422	No protein	-	lncRNA	-	-
ENST00000781946.1	CYP2U1-AS1-221	413	No protein	-	lncRNA	-	-
ENST00000781789.1	CYP2U1-AS1-212	410	No protein	-	lncRNA	-	-
ENST00000781797.1	CYP2U1-AS1-220	379	No protein	-	lncRNA	-	-
ENST00000781793.1	CYP2U1-AS1-216	376	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000781796.1	CYP2U1-AS1-219	358	No protein	-	lncRNA	-	-
ENST00000781790.1	CYP2U1-AS1-213	335	No protein	-	lncRNA	-	-
ENST00000781795.1	CYP2U1-AS1-218	266	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 3,587 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000513071.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000513071.2 CYP2U1-AS1-203

Summary

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Transcript: ENST00000513071.2 CYP2U1-AS1-203

Summary

About Us

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