Transcript: ENST00000505454.1

Description

novel transcript

Location

Chromosome 4: 137,645,265-137,655,174 reverse strand.

About this transcript

This transcript has 4 exons and maps to 135 oligo probes.

Gene

This transcript is a product of gene ENSG00000250126.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000765862.1	-	737	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000765956.1	-	2336	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000765977.1	-	1719	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000765960.1	-	1692	No protein	-	lncRNA	-	-
ENST00000765957.1	-	1600	No protein	-	lncRNA	-	-
ENST00000765958.1	-	1557	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000765978.1	-	1543	No protein	-	lncRNA	-	-
ENST00000765964.1	-	1528	No protein	-	lncRNA	-	-
ENST00000671270.2	-	1520	No protein	-	lncRNA	-	-
ENST00000765863.1	-	1046	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000765979.1	-	1009	No protein	-	lncRNA	-	-
ENST00000765962.1	-	988	No protein	-	lncRNA	-	-
ENST00000765961.1	-	811	No protein	-	lncRNA	-	-
ENST00000765867.1	-	800	No protein	-	lncRNA	-	-
ENST00000765868.1	-	770	No protein	-	lncRNA	-	-
ENST00000765963.1	-	749	No protein	-	lncRNA	-	-
ENST00000765967.1	-	684	No protein	-	lncRNA	-	-
ENST00000765983.1	-	670	No protein	-	lncRNA	-	-
ENST00000765965.1	-	661	No protein	-	lncRNA	-	-
ENST00000765968.1	-	660	No protein	-	lncRNA	-	-
ENST00000765971.1	-	636	No protein	-	lncRNA	-	-
ENST00000765975.1	-	636	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000765972.1	-	632	No protein	-	lncRNA	-	-
ENST00000765984.1	-	621	No protein	-	lncRNA	-	-
ENST00000765866.1	-	596	No protein	-	lncRNA	-	-
ENST00000765982.1	-	581	No protein	-	lncRNA	-	-
ENST00000765969.1	-	572	No protein	-	lncRNA	-	-
ENST00000765990.1	-	554	No protein	-	lncRNA	-	-
ENST00000765864.1	-	544	No protein	-	lncRNA	-	-
ENST00000765980.1	-	538	No protein	-	lncRNA	-	-
ENST00000765986.1	-	527	No protein	-	lncRNA	-	-
ENST00000765970.1	-	523	No protein	-	lncRNA	-	-
ENST00000510922.1	-	512	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000765985.1	-	510	No protein	-	lncRNA	-	-
ENST00000765966.1	-	494	No protein	-	lncRNA	-	-
ENST00000765974.1	-	494	No protein	-	lncRNA	-	-
ENST00000765973.1	-	488	No protein	-	lncRNA	-	-
ENST00000765987.1	-	477	No protein	-	lncRNA	-	-
ENST00000765865.1	-	437	No protein	-	lncRNA	-	-
ENST00000765981.1	-	428	No protein	-	lncRNA	-	-
ENST00000765959.1	-	424	No protein	-	lncRNA	-	-
ENST00000765989.1	-	404	No protein	-	lncRNA	-	-
ENST00000505454.1	-	396	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000765988.1	-	385	No protein	-	lncRNA	-	-
ENST00000765976.1	-	347	No protein	-	lncRNA	-	-
ENST00000765869.1	-	230	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 396 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000505454.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000505454.1

Summary

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Transcript: ENST00000505454.1

Summary

About Us

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