Transcript: ENST00000482052.7 HLA-L-213

Description

major histocompatibility complex, class I, L (pseudogene) [Source:HGNC Symbol;Acc:HGNC:4970]

Gene Synonyms

HLA-92, HLA92, HLAL

Location

Chromosome 6: 30,259,548-30,293,016 forward strand.

About this transcript

This transcript has 6 exons, is associated with 11758 variant alleles and maps to 1172 oligo probes.

Gene

This transcript is a product of gene ENSG00000291097.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000482052.7	HLA-L-213	1803	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENST00000463348.6	HLA-L-212	4631	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENST00000701167.1	HLA-L-223	2354	No protein	-	lncRNA	-	-
ENST00000702262.1	HLA-L-225	1842	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000686490.1	HLA-L-215	1803	No protein	-	lncRNA	-	-
ENST00000691389.2	HLA-L-219	1730	No protein	-	lncRNA	-	-
ENST00000845134.1	HLA-L-239	1716	No protein	-	lncRNA	-	-
ENST00000702345.2	HLA-L-226	1698	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000692540.1	HLA-L-221	1671	No protein	-	lncRNA	-	-
ENST00000845135.1	HLA-L-240	1669	No protein	-	lncRNA	-	-
ENST00000845123.1	HLA-L-228	1583	No protein	-	lncRNA	-	-
ENST00000845122.1	HLA-L-227	1566	No protein	-	lncRNA	-	-
ENST00000845125.1	HLA-L-230	1559	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000701874.1	HLA-L-224	1522	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000691908.1	HLA-L-220	1507	No protein	-	lncRNA	-	-
ENST00000845136.1	HLA-L-241	1478	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000687061.1	HLA-L-216	1459	No protein	-	lncRNA	-	-
ENST00000845126.1	HLA-L-231	1423	No protein	-	lncRNA	-	-
ENST00000845124.1	HLA-L-229	1386	No protein	-	lncRNA	-	-
ENST00000845137.1	HLA-L-242	1378	No protein	-	lncRNA	-	-
ENST00000685314.1	HLA-L-214	1336	No protein	-	lncRNA	-	-
ENST00000845127.1	HLA-L-232	1299	No protein	-	lncRNA	-	-
ENST00000687983.1	HLA-L-218	1214	No protein	-	lncRNA	-	-
ENST00000692925.2	HLA-L-222	1111	No protein	-	lncRNA	-	-
ENST00000845132.1	HLA-L-237	1079	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000687694.2	HLA-L-217	1066	No protein	-	lncRNA	-	-
ENST00000845129.1	HLA-L-234	987	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000845130.1	HLA-L-235	956	No protein	-	lncRNA	-	-
ENST00000845133.1	HLA-L-238	741	No protein	-	lncRNA	-	-
ENST00000845128.1	HLA-L-233	676	No protein	-	lncRNA	-	-
ENST00000845131.1	HLA-L-236	593	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 1,803 bps,

Transcript Support Level (TSL)

TSL:NA

Version

ENST00000482052.7

Type

LncRNA

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana (TAGENE) manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

overlaps pseudogene [Definitions]

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Transcript: ENST00000482052.7 HLA-L-213

Summary

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Transcript: ENST00000482052.7 HLA-L-213

Summary

About Us

Get help

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